Factsheet for TraesCSU01G265100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G185700.1	Wheat	cytosol, mitochondrion, nucleus	98.6	98.6
HORVU0Hr1G032810.1	Barley	cytosol	58.04	97.65
TraesCS4A01G152200.1	Wheat	cytosol, mitochondrion, nucleus	96.5	96.5
TraesCS1D01G136200.1	Wheat	cytosol, mitochondrion, nucleus	96.5	96.5
TraesCS5D01G010600.1	Wheat	cytosol, mitochondrion	95.8	95.8
TraesCS1D01G171600.1	Wheat	cytosol	93.01	93.01
CDY15330	Canola	cytosol, extracellular, mitochondrion	38.46	76.39
KRH41779	Soybean	cytosol, mitochondrion, nucleus	34.97	73.53
HORVU6Hr1G049240.1	Barley	cytosol, nucleus, plastid	97.2	61.78
HORVU4Hr1G045220.1	Barley	cytosol, nucleus, plastid	97.2	61.78
HORVU0Hr1G036360.3	Barley	cytosol, nucleus, plastid	97.2	61.78
HORVU5Hr1G064680.1	Barley	plastid	96.5	61.33
AGP50759	Barley	plastid	97.2	56.73
HORVU7Hr1G051200.1	Barley	cytosol	88.81	56.19
Solyc06g036210.1.1	Tomato	mitochondrion	42.66	52.59
Solyc01g007300.1.1	Tomato	nucleus	81.12	51.56
CDY38703	Canola	mitochondrion, nucleus, plasma membrane, plastid	80.42	51.11
CDX99948	Canola	mitochondrion, nucleus, plasma membrane, plastid	80.42	51.11
CDX98581	Canola	mitochondrion, nucleus, plasma membrane, plastid	80.42	51.11
ATCG00430.1	Thale cress	cytosol, mitochondrion, nucleus	79.72	50.67
PGSC0003DMT400017976	Potato	plastid	72.73	49.06
HORVU0Hr1G036850.1	Barley	cytosol, extracellular, plastid	59.44	47.75

Protein Annotations

Gene3D:3.40.50.12280	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0048038	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114
InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PFAM:PF01058	ScanProsite:PS01150	PANTHER:PTHR11995	PANTHER:PTHR11995:SF21
SUPFAM:SSF56770	EnsemblPlantsGene:TraesCSU01G265100	EnsemblPlants:TraesCSU01G265100.1	:	:	:

Description

No Description!

Coordinates

chrUn:-:432822806..432823237

Molecular Weight (calculated)

16107.5 Da

IEP (calculated)

9.539

GRAVY (calculated)

-0.387

Length

143 amino acids

Sequence
(BLAST)

001: MKMAPSLVRL YEQMPEPKYV IAMGACTITG GMFSTDSYST VRGVDKLIPV DVYLPGCPPK PEAVIDALTK LRKKISREIV EDRTLSQNKN RCFTTSHKLY
101: ARRSTHTGTY EQELLYQSPS TLDISSETFF KSKSSVPSYK LVN

Best Arabidopsis Sequence Match ( ATCG00430.1 )
(BLAST)

001: MNSIKFPILD RTTKNSVIST TLNDLSNWSR LSSLWPLLYG TSCCFIEFAS LIGSRFDFDR YGLVPRSSPR QADLILTAGT VTMKMAPSLV RLYEQMPEPK
101: YVIAMGACTI TGGMFSTDSY STVRGVDKLI PVDVYLPGCP PKPEAVIDAI TKLRKKIARE IYKDRIRPQQ GNRCFTTNHK FFVVRSPHIG NYDQELLYPP
201: SSTSEISTET FFKYKSPVSS HELVN

Arabidopsis Description

NDHKNAD(P)H-quinone oxidoreductase subunit K, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4U5]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.