Factsheet for TraesCS1D01G205100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G255200.1	Wheat	cytosol	48.44	97.32
TraesCS5D01G459000.1	Wheat	cytosol, nucleus, plastid	96.0	96.0
TraesCS1D01G181300.1	Wheat	plastid	95.11	95.11
TraesCS1D01G136200.1	Wheat	cytosol, mitochondrion, nucleus	60.0	94.41
EES03029	Sorghum	plastid	94.67	93.83
TraesCS5D01G010600.1	Wheat	cytosol, mitochondrion	59.56	93.71
TraesCS1D01G169800.1	Wheat	cytosol, extracellular, mitochondrion	50.22	93.39
TraesCS2D01G595600.1	Wheat	plastid	92.0	92.83
Os12t0423484-00	Rice	cytosol	33.33	92.59
TraesCS1D01G171600.1	Wheat	cytosol	58.67	92.31
Solyc01g007300.1.1	Tomato	nucleus	83.56	83.56
GRMZM5G800980_P01	Maize	plastid	94.67	83.53
CDX98581	Canola	mitochondrion, nucleus, plasma membrane, plastid	83.11	83.11
CDY38703	Canola	mitochondrion, nucleus, plasma membrane, plastid	83.11	83.11
CDX99948	Canola	mitochondrion, nucleus, plasma membrane, plastid	83.11	83.11
ATCG00430.1	Thale cress	cytosol, mitochondrion, nucleus	82.67	82.67
PGSC0003DMT400017976	Potato	plastid	77.78	82.55
CDY15330	Canola	cytosol, extracellular, mitochondrion	23.56	73.61
KRH41779	Soybean	cytosol, mitochondrion, nucleus	21.78	72.06
Solyc06g036210.1.1	Tomato	mitochondrion	28.0	54.31
TraesCS3D01G287400.1	Wheat	mitochondrion	26.22	29.21
TraesCS1D01G357100.1	Wheat	mitochondrion	26.22	28.78

Protein Annotations

EnsemblPlants:TraesCS1D01G205100.1	EnsemblPlantsGene:TraesCS1D01G205100	Gene3D:3.40.50.12280	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0048038	GO:GO:0051536	GO:GO:0051539
GO:GO:0055114	InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PANTHER:PTHR11995	PANTHER:PTHR11995:SF21	PFAM:PF01058
ScanProsite:PS01150	SEG:seg	SUPFAM:SSF56770	TIGRFAMs:TIGR01957	MapMan:1.1.8.1.2.4	:

Description

No Description!

Coordinates

chr1D:-:290506124..290506801

Molecular Weight (calculated)

25316.4 Da

IEP (calculated)

8.445

GRAVY (calculated)

-0.198

Length

225 amino acids

Sequence
(BLAST)

001: MNFIEFPLLD QTSSNSIIST TPNDLSNRSR LSSLWPLLYG TSCCFIEFAS LIGSRFDFDR YGLVPRSSPR QADLILTAGT VTMKMAPSLV RLYEQMPEPK
101: YVIAMGACTI IGEMFSTDSY STVRGVDKLI PVDVYLPGCP PKPEAVIDAL TKLRKKISRE IVEDRTLSEN KNRCFTTSHK LYVRRSTHTG TYEQELLYQS
201: PSTLDISSET FFKSKSSVSS YKLVN

Best Arabidopsis Sequence Match ( ATCG00430.1 )
(BLAST)

001: MNSIKFPILD RTTKNSVIST TLNDLSNWSR LSSLWPLLYG TSCCFIEFAS LIGSRFDFDR YGLVPRSSPR QADLILTAGT VTMKMAPSLV RLYEQMPEPK
101: YVIAMGACTI TGGMFSTDSY STVRGVDKLI PVDVYLPGCP PKPEAVIDAI TKLRKKIARE IYKDRIRPQQ GNRCFTTNHK FFVVRSPHIG NYDQELLYPP
201: SSTSEISTET FFKYKSPVSS HELVN

Arabidopsis Description

NDHKNAD(P)H-quinone oxidoreductase subunit K, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4U5]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.