CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g061580.1.1	Tomato	plastid	55.79	60.23
PGSC0003DMT400002438	Potato	endoplasmic reticulum	63.16	38.22
PGSC0003DMT400074648	Potato	endoplasmic reticulum	64.21	36.31
KRG88442	Soybean	cytosol, mitochondrion, vacuole	64.21	26.18
TraesCS3A01G181300.1	Wheat	golgi	67.37	18.29
KRH12694	Soybean	peroxisome, plasma membrane, plastid	64.21	16.67
KRH12696	Soybean	endoplasmic reticulum	64.21	15.93
HORVU0Hr1G034160.1	Barley	vacuole	66.32	15.79
HORVU3Hr1G004710.1	Barley	plasma membrane	66.32	15.79
HORVU4Hr1G024000.1	Barley	plasma membrane	64.21	15.29
HORVU4Hr1G023920.1	Barley	plasma membrane	63.16	15.04
GRMZM5G834128_P01	Maize	plasma membrane	66.32	13.04
ATMG00513.1	Thale cress	extracellular, plasma membrane, vacuole	65.26	12.86
CDY45521	Canola	endoplasmic reticulum	65.26	11.88
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	65.26	11.79

Protein Annotations

MapMan:35.1	UniProt:A0A194YRJ8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006091	GO:GO:0006139
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0042773	GO:GO:0055114	EnsemblPlants:KXG30817	ProteinID:KXG30817	ProteinID:KXG30817.1
InterPro:ND/Mrp_mem	PFAM:PF00361	PANTHER:PTHR42829	PANTHER:PTHR42829:SF2	EnsemblPlantsGene:SORBI_3004G249200	UniParc:UPI0007F2F234

Description

hypothetical protein

Coordinates

chr4:+:59604743..59605854

Molecular Weight (calculated)

10776.2 Da

IEP (calculated)

10.081

GRAVY (calculated)

0.187

Length

95 amino acids

Sequence
(BLAST)

1: MCFFSERSIT SIVREIKTRQ SMMSFRAATT GMLQSDLKRA IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHERC NKQTR

Best Arabidopsis Sequence Match ( ATMG00513.1 )
(BLAST)

001: MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS
101: ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR
201: ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AK

Arabidopsis Description

NAD5ANADH dehydrogenase 5A [Source:TAIR;Acc:ATMG00513]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.