CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G034160.1	Barley	vacuole	71.46	93.48
HORVU3Hr1G004710.1	Barley	plasma membrane	71.26	93.23
HORVU4Hr1G024000.1	Barley	plasma membrane	70.31	91.98
TraesCS3A01G181300.1	Wheat	golgi	61.3	91.43
HORVU4Hr1G023920.1	Barley	plasma membrane	69.54	90.98
PGSC0003DMT400002438	Potato	endoplasmic reticulum	26.82	89.17
HORVU5Hr1G072300.1	Barley	vacuole	52.87	88.18
KRG88442	Soybean	cytosol, mitochondrion, vacuole	38.7	86.7
Solyc03g061580.1.1	Tomato	plastid	14.18	84.09
PGSC0003DMT400074648	Potato	endoplasmic reticulum	27.01	83.93
ATMG00513.1	Thale cress	extracellular, plasma membrane, vacuole	75.67	81.95
GRMZM5G834128_P01	Maize	plasma membrane	72.22	78.05
HORVU3Hr1G045020.1	Barley	endoplasmic reticulum	23.56	69.89
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	68.01	67.49
KXG30817	Sorghum	plastid	11.88	65.26
KRH12694	Soybean	peroxisome, plasma membrane, plastid	39.85	56.83
KRH12696	Soybean	endoplasmic reticulum	40.61	55.35
CDX71645	Canola	plastid	31.03	26.0
CDY19664	Canola	endoplasmic reticulum, plasma membrane	18.2	24.42

Protein Annotations

MapMan:2.4.1.3.6	GO:A0A078I6N0	UniProt:A0A078I6N0	EnsemblPlants:CDY45521	ProteinID:CDY45521	ProteinID:CDY45521.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006091	GO:GO:0006139	GO:GO:0008137	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0042773
GO:GO:0055114	GO:GO:0070469	EnsemblPlantsGene:GSBRNA2T00082207001	InterPro:NADHpl_OxRdtase_5	InterPro:ND/Mrp_mem	PFAM:PF00361
PFAM:PF00662	PRINTS:PR01434	PANTHER:PTHR42829	PANTHER:PTHR42829:SF2	InterPro:Proton_antipo_N	TIGRFAMs:TIGR01974
TMHMM:TMhelix	UniParc:UPI0004EE9799	:	:	:	:

Description

BnaCnng12800DBnaCnng12800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6N0]

Coordinates

chrLK032627:-:140401..143611

Molecular Weight (calculated)

57879.2 Da

IEP (calculated)

9.339

GRAVY (calculated)

0.444

Length

522 amino acids

Sequence
(BLAST)

001: MQGELARFAN SPTVVMLIVV TSISSLVHLY SISYMSEDPH SPRFMCYLSI LTFFMPMLVT GDNSLQLFLG WEGVGLASYL LIHFWFTRLQ ADKAATKAML
101: VNRVGDFGLA PGISGRFTLF QTVDFSTIFA RASAPRNSWI SCNMRFNAIS LICILLLIGA VGKSAQIGSH TWSPDAMEGP TPVSASIHAA TMVTAGVFMI
201: ARCSPLFEYP PTALIVITSA GATTSFLAAT TGILQNDLKR VIAYSTCSQL GYMIFACGIS NYSVSVFHLM NHAFFKALLF LSAGSVIHAM SDEQDMRKMG
301: GLASSFPLTY AMMLIGSLSL IGFPFLTGFY SKDVILELAY TKYTISGNFA FWLGSISVLF TSYYSFRLLF LTFLVPTNSF GRDISRCHDA PIPMAIPSIL
401: LALGSLFVGY LAKPKEKDKA ELPLLPSEVE YGSRFAEYLL IEGFKPLKRK DISLRLKRCG FRRVTPTFCK FLDNRSRIMP AAGTNPIFAH TSLFVWELNQ
501: KHRMKASLQD LFYFPPFFFL VT

Best Arabidopsis Sequence Match ( ATMG00513.1 )
(BLAST)

001: MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS
101: ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR
201: ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AK

Arabidopsis Description

NAD5ANADH dehydrogenase 5A [Source:TAIR;Acc:ATMG00513]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.