Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G034160.1 | Barley | vacuole | 99.75 | 99.75 |
| HORVU4Hr1G024000.1 | Barley | plasma membrane | 98.25 | 98.25 |
| HORVU4Hr1G023920.1 | Barley | plasma membrane | 97.24 | 97.24 |
| TraesCS3A01G181300.1 | Wheat | golgi | 85.21 | 97.14 |
| HORVU5Hr1G072300.1 | Barley | vacuole | 74.44 | 94.89 |
| PGSC0003DMT400002438 | Potato | endoplasmic reticulum | 35.84 | 91.08 |
| Solyc03g061580.1.1 | Tomato | plastid | 19.05 | 86.36 |
| KRG88442 | Soybean | cytosol, mitochondrion, vacuole | 50.38 | 86.27 |
| PGSC0003DMT400074648 | Potato | endoplasmic reticulum | 35.84 | 85.12 |
| HORVU3Hr1G045020.1 | Barley | endoplasmic reticulum | 34.59 | 78.41 |
| ATMG00513.1 | Thale cress | extracellular, plasma membrane, vacuole | 93.98 | 77.8 |
| CDY45521 | Canola | endoplasmic reticulum | 93.23 | 71.26 |
| KXG30817 | Sorghum | plastid | 15.79 | 66.32 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, plastid | 86.97 | 65.97 |
| KRH12694 | Soybean | peroxisome, plasma membrane, plastid | 51.63 | 56.28 |
| KRH12696 | Soybean | endoplasmic reticulum | 51.88 | 54.05 |
| HORVU5Hr1G005440.1 | Barley | plasma membrane | 32.58 | 35.33 |
| HORVU2Hr1G044830.1 | Barley | endoplasmic reticulum | 7.77 | 32.63 |
| HORVU1Hr1G048170.1 | Barley | endoplasmic reticulum, plasma membrane | 46.12 | 24.9 |
| HORVU0Hr1G036330.1 | Barley | endoplasmic reticulum, plasma membrane | 46.12 | 24.9 |
| HORVU0Hr1G025220.1 | Barley | endoplasmic reticulum, plasma membrane | 46.12 | 24.9 |
| AGP50802 | Barley | plastid | 46.12 | 24.9 |
| HORVU2Hr1G044770.1 | Barley | plasma membrane | 17.04 | 16.39 |
| HORVU6Hr1G037310.1 | Barley | cytosol | 10.28 | 10.96 |
Protein Annotations
| MapMan:2.4.1.3.6 | UniProt:A0A287JZP3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006091 |
| GO:GO:0006139 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0042773 | GO:GO:0055114 | EnsemblPlantsGene:HORVU3Hr1G004710 | EnsemblPlants:HORVU3Hr1G004710.1 |
| InterPro:NADHpl_OxRdtase_5 | InterPro:ND/Mrp_mem | PFAM:PF00361 | PFAM:PF00662 | PRINTS:PR01434 | PANTHER:PTHR42829 |
| PANTHER:PTHR42829:SF2 | InterPro:Proton_antipo_N | TIGRFAMs:TIGR01974 | TMHMM:TMhelix | UniParc:UPI000B467E95 | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:+:11879281..11880480
Molecular Weight (calculated)
44048.7 Da
IEP (calculated)
7.732
GRAVY (calculated)
0.811
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIVVTFISS LVHLYSISYM SEDPHSPRFM CYLSIFTFFM LMLVTGDNFL QLFLGWEGVG LASYLLIHFW FTRLQADKAA IKAMLVNRVG DFGLALGIFG
101: CFTLFQTVDF STIFACASAP RNEWIFCNMR LNAITLICIL LFIGAVGKSA QIGLHTWLPD AMEGPTPVSA LIHAATMVTA GVFMIARCSP LFEYSPTALI
201: VITFAGAMTS FLAATTGILQ NDLKRVIAYS TCSQLGYMIF ACGISNYSVS VFHLMNHAFF KALLFLSAGS VIHAMSDEQD MRKMGGLASS FPLTYAMMLM
301: GSLSLIGFPF LTGFYSKDVI LELAYTKYTI SGNFAFWLGS VSVLFTSYYS FRLLFLTFLV PTNSFGQDRL RCHDAPIPMA IPLILLALGS LFVGYLAKV
101: CFTLFQTVDF STIFACASAP RNEWIFCNMR LNAITLICIL LFIGAVGKSA QIGLHTWLPD AMEGPTPVSA LIHAATMVTA GVFMIARCSP LFEYSPTALI
201: VITFAGAMTS FLAATTGILQ NDLKRVIAYS TCSQLGYMIF ACGISNYSVS VFHLMNHAFF KALLFLSAGS VIHAMSDEQD MRKMGGLASS FPLTYAMMLM
301: GSLSLIGFPF LTGFYSKDVI LELAYTKYTI SGNFAFWLGS VSVLFTSYYS FRLLFLTFLV PTNSFGQDRL RCHDAPIPMA IPLILLALGS LFVGYLAKV
001: MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS
101: ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR
201: ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AK
101: ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR
201: ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AK
Arabidopsis Description
NAD5ANADH dehydrogenase 5A [Source:TAIR;Acc:ATMG00513]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.