Factsheet for HORVU6Hr1G037310.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G044770.1	Barley	plasma membrane	91.18	82.17
PGSC0003DMT400028453	Potato	mitochondrion	21.39	62.02
KRH03697	Soybean	endoplasmic reticulum, plasma membrane	9.63	51.43
HORVU0Hr1G025220.1	Barley	endoplasmic reticulum, plasma membrane	97.86	49.53
HORVU0Hr1G036330.1	Barley	endoplasmic reticulum, plasma membrane	97.86	49.53
HORVU1Hr1G048170.1	Barley	endoplasmic reticulum, plasma membrane	97.86	49.53
AGP50802	Barley	plastid	97.86	49.53
Solyc05g013100.1.1	Tomato	golgi, mitochondrion, plastid	13.9	43.33
CDY19664	Canola	endoplasmic reticulum, plasma membrane	44.65	42.93
PGSC0003DMT400074606	Potato	endoplasmic reticulum, extracellular	51.34	33.1
ATCG01010.1	Thale cress	plasma membrane	55.62	27.88
CDX71645	Canola	plastid	44.65	26.81
VIT_00s0246g00140.t01	Wine grape	plasma membrane	34.22	26.39
KRH28854	Soybean	plasma membrane	10.7	20.3
HORVU4Hr1G023920.1	Barley	plasma membrane	10.96	10.28
HORVU3Hr1G004710.1	Barley	plasma membrane	10.96	10.28
HORVU4Hr1G024000.1	Barley	plasma membrane	10.7	10.03
HORVU0Hr1G034160.1	Barley	vacuole	10.7	10.03
HORVU5Hr1G072300.1	Barley	vacuole	3.74	4.47
HORVU5Hr1G005440.1	Barley	plasma membrane	2.41	2.45
HORVU3Hr1G045020.1	Barley	endoplasmic reticulum	0.0	0.0
HORVU2Hr1G044830.1	Barley	endoplasmic reticulum	0.0	0.0
Solyc05g013110.1.1	Tomato	vacuole	0.0	0.0
TraesCS6A01G152800.1	Wheat	vacuole	0.0	0.0
VIT_00s0246g00150.t01	Wine grape	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

MapMan:35.1	UniProt:A0A287TXY2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006139	GO:GO:0008137	GO:GO:0008150
GO:GO:0008152	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0042773	GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G037310	EnsemblPlants:HORVU6Hr1G037310.1	InterPro:NADH_UbQ_OxRdtase_chlpt_su5_C	InterPro:NADHpl_OxRdtase_5_subgr
InterPro:ND/Mrp_mem	PFAM:PF00361	PFAM:PF01010	PRINTS:PR01435	PANTHER:PTHR42829	PANTHER:PTHR42829:SF3
TMHMM:TMhelix	UniParc:UPI000B4696A7	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:187154876..187157106

Molecular Weight (calculated)

41302.9 Da

IEP (calculated)

9.459

GRAVY (calculated)

0.220

Length

374 amino acids

Sequence
(BLAST)

001: MEPLVGYSPD KSQNMVLMGG LRKYIPITRT TFLWGTLSLC GIPPLACFWS KDEILSNSWL YSPFFGIIAS FTAGLTAFYM FRIYLLTFGG YLRVHFQNYS
101: STKESSLYSI SLWGKRIPKG VNRDFVLSTT KSGVSFFSQN IPKIQGNTRN RIGSFTTSFG AKNTFAYPHE TGNTMLFPLL ILLLFTLFIG FIGISFDNGG
201: MDNGIAELTI LSKWLTPSKN FTQESSNSFV NSYEFITNAI SSVTLAIFGL FIAYIFYGSA YSFFQNLDLI NSFVKRNPKK EFLDQVKKNI YSWSYNRGYI
301: DIFYTRVFTL GIRGLTELTE FFDKGVIDGI TNGVGLASFC IGEEIKYVGG GRISSYLFFF LCYVSVXXXX XXXX

Best Arabidopsis Sequence Match ( ATCG01010.1 )
(BLAST)

001: MEHTYQYSWI IPFIPLPVPI LLGVGLLLFP TATKNLRRMW TFLSIFLLSI VMIFSIYLSI QQIFLSCIHQ NVWSWTINNE FSFEFGYFID PLTSIMSILI
101: TTVGILVLIY SDNYMSHDQG YLRFFAYMGF FNTSMLGLVT SSNLIQVYFF WELVGMCSYL LIGFWFTRPI AANACQKAFV TNRVGDFGLL LGILGLYWIT
201: GSFEFQDLFE IFNNLILNNR VNLLFLTLCA FLLFVGPIAK SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGIFLVARL LPLFIVIPSI MYIISLIGII
301: TVLLGATLAL AQKDIKRGLA YSTMSQLGYM MLALGMGSYR SALFHLITHA YSKALLFLGS GSIIHSMEAI VGYSPDKSQN MILMGGLTKH VPITKTAFLI
401: GTLSLCGIPP LACFWSKDEI LNDSLLFSPI FAIIACSTAG LTAFYMFRIY LLTFEGHLNT YFLNYSGKKS GSFYSLSLWG KEEEKKLNKN FGLVPLLTMN
501: NTKRASFFCN KTYKISNNVR NQIFITVENF GLNTRTFYYP HESDNTILFP MLILVLFTLF IGAIGIPFNQ EGIDFDILSK FFTPSINLLH KNSQNFVDWY
601: EFLRNATFSV SIAFFGIFIA YCLYKPFYSS LLNLTLLNSF QKWNSKRIHW EKLINFVYNW SYNRGYIDSF FKTSLIESIR RLAKQTTFFD KRIIDGITNG
701: VGITSFFVGE VTKYIGGSRI SSYLFLYLSY VLIFLMILFF FYFEKF

Arabidopsis Description

NDHFNAD(P)H-quinone oxidoreductase subunit 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56752]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.