Factsheet for HORVU4Hr1G024000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G034160.1	Barley	vacuole	98.5	98.5
HORVU3Hr1G004710.1	Barley	plasma membrane	98.25	98.25
HORVU4Hr1G023920.1	Barley	plasma membrane	96.24	96.24
TraesCS3A01G181300.1	Wheat	golgi	83.96	95.71
HORVU5Hr1G072300.1	Barley	vacuole	73.18	93.29
PGSC0003DMT400002438	Potato	endoplasmic reticulum	35.34	89.81
KRG88442	Soybean	cytosol, mitochondrion, vacuole	49.87	85.41
PGSC0003DMT400074648	Potato	endoplasmic reticulum	35.09	83.33
Solyc03g061580.1.1	Tomato	plastid	18.3	82.95
ATMG00513.1	Thale cress	extracellular, plasma membrane, vacuole	92.73	76.76
HORVU3Hr1G045020.1	Barley	endoplasmic reticulum	33.83	76.7
CDY45521	Canola	endoplasmic reticulum	91.98	70.31
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	85.71	65.02
KXG30817	Sorghum	plastid	15.29	64.21
KRH12694	Soybean	peroxisome, plasma membrane, plastid	51.13	55.74
KRH12696	Soybean	endoplasmic reticulum	51.38	53.52
HORVU5Hr1G005440.1	Barley	plasma membrane	32.08	34.78
HORVU2Hr1G044830.1	Barley	endoplasmic reticulum	7.52	31.58
HORVU1Hr1G048170.1	Barley	endoplasmic reticulum, plasma membrane	45.36	24.49
HORVU0Hr1G036330.1	Barley	endoplasmic reticulum, plasma membrane	45.36	24.49
HORVU0Hr1G025220.1	Barley	endoplasmic reticulum, plasma membrane	45.36	24.49
AGP50802	Barley	plastid	45.36	24.49
HORVU2Hr1G044770.1	Barley	plasma membrane	16.79	16.14
HORVU6Hr1G037310.1	Barley	cytosol	10.03	10.7

Protein Annotations

MapMan:2.4.1.3.6	UniProt:A0A287NJL9	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091
GO:GO:0006139	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0042773	GO:GO:0055114	EnsemblPlantsGene:HORVU4Hr1G024000	EnsemblPlants:HORVU4Hr1G024000.1
InterPro:NADHpl_OxRdtase_5	InterPro:ND/Mrp_mem	PFAM:PF00361	PFAM:PF00662	PRINTS:PR01434	PANTHER:PTHR42829
PANTHER:PTHR42829:SF2	InterPro:Proton_antipo_N	TIGRFAMs:TIGR01974	TMHMM:TMhelix	UniParc:UPI000B473A71	SEG:seg

Description

No Description!

Coordinates

chrchr4H:-:134604881..134606080

Molecular Weight (calculated)

43831.5 Da

IEP (calculated)

7.913

GRAVY (calculated)

0.809

Length

399 amino acids

Sequence
(BLAST)

001: MLIVVTFISS LVHLYSISYM SEDPHSPRFM CYLSIFTFFM LMLVTGDNFL QLFLGWEGVG LASYLLIHFW FTRLQADKAA IKAMLVNRVG DFGLALGIFG
101: CFTLFQTVDF STIFACASAP KNECIFCNMR LNAITLICIL LFIGAVGKSA QIGLHTWLPD ATEGPTPVSA LIHAATMVTA GVFMIARCSP LFEYSPTALI
201: VITFAGAMTS SLAATAGILQ NDLKRVIAYS TCSQLGYMIF ACGISNYSVS VFHLMNHAFF KALLFLSAGS VIHAMSDEQD MRKMGGLASS FPLTYAMMLM
301: GSLSLIGFPF LTGFYSKDVI LDLAYTKYTI SGNFAFWLGS VSVLFTSYYS FRLLFLTFLV PTNSFGRDRL RCHDAPIPMA IPLILLALGS LFVGYLAKV

Best Arabidopsis Sequence Match ( ATMG00513.1 )
(BLAST)

001: MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS
101: ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR
201: ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AK

Arabidopsis Description

NAD5ANADH dehydrogenase 5A [Source:TAIR;Acc:ATMG00513]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.