CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88442	Soybean	cytosol, mitochondrion, vacuole	56.83	89.27
PGSC0003DMT400002438	Potato	endoplasmic reticulum	33.61	78.34
Solyc03g061580.1.1	Tomato	plastid	16.67	69.32
KRH12696	Soybean	endoplasmic reticulum	71.86	68.67
KXG30817	Sorghum	plastid	16.67	64.21
PGSC0003DMT400074648	Potato	endoplasmic reticulum	26.23	57.14
HORVU0Hr1G034160.1	Barley	vacuole	56.56	51.88
HORVU3Hr1G004710.1	Barley	plasma membrane	56.28	51.63
HORVU4Hr1G024000.1	Barley	plasma membrane	55.74	51.13
TraesCS3A01G181300.1	Wheat	golgi	48.09	50.29
HORVU4Hr1G023920.1	Barley	plasma membrane	54.64	50.13
ATMG00513.1	Thale cress	extracellular, plasma membrane, vacuole	56.83	43.15
GRMZM5G834128_P01	Maize	plasma membrane	56.56	42.86
CDY45521	Canola	endoplasmic reticulum	56.83	39.85
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	54.92	38.21
HORVU5Hr1G072300.1	Barley	vacuole	31.15	36.42
KRH28854	Soybean	plasma membrane	16.39	30.46
KRH03697	Soybean	endoplasmic reticulum, plasma membrane	3.28	17.14
HORVU3Hr1G045020.1	Barley	endoplasmic reticulum	4.1	8.52

Protein Annotations

EMBL:ACUP02009366	EnsemblPlants:KRH12694	EnsemblPlantsGene:GLYMA_15G187600	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0016020	GO:GO:0016021	InterPro:ND/Mrp_mem	PANTHER:PTHR42829
PANTHER:PTHR42829:SF2	PFAM:PF00361	PRINTS:PR01434	ProteinID:KRH12694	ProteinID:KRH12694.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0006EDC72C	UniProt:A0A0R0G2Z7	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr15:+:19581175..19583726

Molecular Weight (calculated)

40701.5 Da

IEP (calculated)

9.993

GRAVY (calculated)

0.110

Length

366 amino acids

Sequence
(BLAST)

001: MFNDGVIARC SPLFEYPPTA LIVITSAGAT TSFLAATTGI LQNDLKRVIA YSTCSQLGYM IFACGISNYS VSIFHLMNHA FFKALLFLSA GSVIHAMSDE
101: QDMRKMGGLA SSFPFTYAMM LMGSLSLIGF PFLTGFYSKD VILELAYTKY TISRNFAFWL GSVSVLFTSY YSFRSLFLTF LVPTNSFGRD ILQCHDVPIP
201: MAIPLILLAL GSLFVGYLAK RLLLTRHDQL GIGCGRNSRQ WLRCSVDSLT FVGVRTPYET GTSGINVFQF LALHRPSNGP WTKRPLPERT MSRGPPPPTR
301: YISRLWAAIT IQEDTRNWKD KQTHPVDCRA TSPTTQERDS LKSQGRGWPR GPTWRLGISA GNAKVA

Best Arabidopsis Sequence Match ( ATMG00513.1 )
(BLAST)

001: MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS
101: ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR
201: ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AK

Arabidopsis Description

NAD5ANADH dehydrogenase 5A [Source:TAIR;Acc:ATMG00513]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.