Factsheet for HORVU3Hr1G045020.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G072300.1	Barley	vacuole	76.7	43.13
HORVU0Hr1G034160.1	Barley	vacuole	78.41	34.59
HORVU3Hr1G004710.1	Barley	plasma membrane	78.41	34.59
HORVU4Hr1G024000.1	Barley	plasma membrane	76.7	33.83
HORVU4Hr1G023920.1	Barley	plasma membrane	76.7	33.83
HORVU2Hr1G044830.1	Barley	endoplasmic reticulum	18.18	33.68
PGSC0003DMT400074648	Potato	endoplasmic reticulum	27.27	28.57
GRMZM5G834128_P01	Maize	plasma membrane	77.84	28.36
ATMG00513.1	Thale cress	extracellular, plasma membrane, vacuole	71.02	25.93
CDY45521	Canola	endoplasmic reticulum	69.89	23.56
HORVU5Hr1G005440.1	Barley	plasma membrane	43.18	20.65
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	59.09	19.77
PGSC0003DMT400002438	Potato	endoplasmic reticulum	16.48	18.47
Solyc03g061580.1.1	Tomato	plastid	9.09	18.18
HORVU1Hr1G048170.1	Barley	endoplasmic reticulum, plasma membrane	43.75	10.42
HORVU0Hr1G036330.1	Barley	endoplasmic reticulum, plasma membrane	43.75	10.42
HORVU0Hr1G025220.1	Barley	endoplasmic reticulum, plasma membrane	43.75	10.42
AGP50802	Barley	plastid	43.75	10.42
KRG88442	Soybean	cytosol, mitochondrion, vacuole	9.09	6.87
KRH12694	Soybean	peroxisome, plasma membrane, plastid	8.52	4.1
KRH12696	Soybean	endoplasmic reticulum	8.52	3.92
HORVU2Hr1G044770.1	Barley	plasma membrane	0.0	0.0
HORVU6Hr1G037310.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU3Hr1G045020.1	EnsemblPlantsGene:HORVU3Hr1G045020	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:ND/Mrp_mem
PANTHER:PTHR42829	PANTHER:PTHR42829:SF2	PFAM:PF00361	PRINTS:PR01434	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B480BAC	UniProt:A0A287KXI6	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:293591031..293591926

Molecular Weight (calculated)

17903.4 Da

IEP (calculated)

7.899

GRAVY (calculated)

0.689

Length

176 amino acids

Sequence
(BLAST)

001: MLMLVTEDKV LQLFLGLEGV GLASYFLIHF WFKRLQADEA VIKAMLVNRV GDFGLALGIF GCFTLFQTIH FSTIFSCASA PRNEWTFCNM RLNAITLICI
101: LLFVGVVGKS THIKLHTWLP YAMEGPTPVS SLIHAATMVT AGVLMIARCS PLLEYSPTTL ANXXXXXXXX XXXXXX

Best Arabidopsis Sequence Match ( ATMG00513.1 )
(BLAST)

001: MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS
101: ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR
201: ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AK

Arabidopsis Description

NAD5ANADH dehydrogenase 5A [Source:TAIR;Acc:ATMG00513]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.