CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88442	Soybean	cytosol, mitochondrion, vacuole	54.57	89.7
PGSC0003DMT400002438	Potato	endoplasmic reticulum	32.11	78.34
KRH12694	Soybean	peroxisome, plasma membrane, plastid	68.67	71.86
Solyc03g061580.1.1	Tomato	plastid	16.19	70.45
KXG30817	Sorghum	plastid	15.93	64.21
PGSC0003DMT400074648	Potato	endoplasmic reticulum	25.07	57.14
HORVU0Hr1G034160.1	Barley	vacuole	54.31	52.13
HORVU3Hr1G004710.1	Barley	plasma membrane	54.05	51.88
HORVU4Hr1G024000.1	Barley	plasma membrane	53.52	51.38
HORVU4Hr1G023920.1	Barley	plasma membrane	52.48	50.38
TraesCS3A01G181300.1	Wheat	golgi	45.95	50.29
ATMG00513.1	Thale cress	extracellular, plasma membrane, vacuole	54.57	43.36
GRMZM5G834128_P01	Maize	plasma membrane	54.31	43.06
CDY45521	Canola	endoplasmic reticulum	55.35	40.61
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	52.48	38.21
HORVU5Hr1G072300.1	Barley	vacuole	29.77	36.42
KRH28854	Soybean	plasma membrane	15.93	30.96
KRH03697	Soybean	endoplasmic reticulum, plasma membrane	3.13	17.14
HORVU3Hr1G045020.1	Barley	endoplasmic reticulum	3.92	8.52

Protein Annotations

MapMan:35.1	UniProt:A0A0R0GBL4	EMBL:ACUP02009366	EnsemblPlantsGene:GLYMA_15G187800	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006091	GO:GO:0006139	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0042773	GO:GO:0055114	EnsemblPlants:KRH12696
ProteinID:KRH12696	ProteinID:KRH12696.1	InterPro:ND/Mrp_mem	PFAM:PF00361	PRINTS:PR01434	PANTHER:PTHR42829
PANTHER:PTHR42829:SF2	TMHMM:TMhelix	UniParc:UPI0006EDB5EE	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:+:19602755..19605357

Molecular Weight (calculated)

42779.2 Da

IEP (calculated)

9.922

GRAVY (calculated)

0.167

Length

383 amino acids

Sequence
(BLAST)

001: MYIILICTIL HISWYNAMFN DGVIARCSPL FEYPPTALIV ITSAGATTSF LAATTGILQN DLKRVIAYST CSQLGYMIFA CGISNYSVSI FHLMNHAFFK
101: ALLFLSAGSV IHAMSDEQDM RKMGGLASSF PFTYAMMLMG SLSLIGFPFL TGFYSKDVIL ELAYTKYTIS RNFAFWLGSV SVLFTSYYSF RSLFLTFLVP
201: TNSFGRDILR CHDVPIPMAI PLILLALGSL FVGYLAKRLL LTRHDQLGIG CGRNSRQWLR CSVDSLTFVG VRTPYETGTS GINVFQFLAL HRPSNGPWTK
301: RPLPERTMSR GPPPPTRYIS RLWAAITIQE DTRNWKDKQT HPVDCRATSP TTQERDSLKS QGRGWPRGPT WRLGISAGNA KVA

Best Arabidopsis Sequence Match ( ATMG00513.1 )
(BLAST)

001: MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS
101: ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR
201: ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AK

Arabidopsis Description

NAD5ANADH dehydrogenase 5A [Source:TAIR;Acc:ATMG00513]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.