Factsheet for GSMUA_AchrUn_randomP08440_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 3
mitochondrion 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G034160.1	Barley	vacuole	66.16	87.22
HORVU3Hr1G004710.1	Barley	plasma membrane	65.97	86.97
HORVU4Hr1G024000.1	Barley	plasma membrane	65.02	85.71
HORVU4Hr1G023920.1	Barley	plasma membrane	64.45	84.96
TraesCS3A01G181300.1	Wheat	golgi	56.27	84.57
KRG88442	Soybean	cytosol, mitochondrion, vacuole	37.07	83.69
HORVU5Hr1G072300.1	Barley	vacuole	47.91	80.51
ATMG00513.1	Thale cress	extracellular, plasma membrane, vacuole	71.1	77.59
PGSC0003DMT400002438	Potato	endoplasmic reticulum	22.81	76.43
GRMZM5G834128_P01	Maize	plasma membrane	70.15	76.4
PGSC0003DMT400074648	Potato	endoplasmic reticulum	23.38	73.21
Solyc03g061580.1.1	Tomato	plastid	11.79	70.45
CDY45521	Canola	endoplasmic reticulum	67.49	68.01
KXG30817	Sorghum	plastid	11.79	65.26
HORVU3Hr1G045020.1	Barley	endoplasmic reticulum	19.77	59.09
KRH12694	Soybean	peroxisome, plasma membrane, plastid	38.21	54.92
KRH12696	Soybean	endoplasmic reticulum	38.21	52.48

Protein Annotations

MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006139	GO:GO:0008137	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0042773	GO:GO:0048038	GO:GO:0055114
EnsemblPlantsGene:GSMUA_AchrUn_randomG08440_001	EnsemblPlants:GSMUA_AchrUn_randomP08440_001	EnsemblPlants:GSMUA_AchrUn_randomT08440_001	UniProt:M0U7F5	InterPro:ND/Mrp_mem	PFAM:PF00361
PFAM:PF00662	PRINTS:PR01434	PANTHER:PTHR42829	PANTHER:PTHR42829:SF2	InterPro:Proton_antipo_N	TMHMM:TMhelix
UniParc:UPI0002962F3D	:	:	:	:	:

Description

NADH-ubiquinone oxidoreductase chain 5 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08440_001]

Coordinates

chrchrUn_random:-:37205209..37209237

Molecular Weight (calculated)

57848.4 Da

IEP (calculated)

8.846

GRAVY (calculated)

0.641

Length

526 amino acids

Sequence
(BLAST)

001: MPRGTPFNNS SLLIGTKLNL LPLPTASKFQ VPYMLLVSMT GDSFDCLQFL SGLLNTLDLM YLLIVFLPLL GSSLAGFFGR FLGSEGTAII TTTLVSLSSI
101: FSLIAFYEVA PGARFKSVEP VNHASRLYAW GRGLVVLPFL LIQPFLRFVM LIVVTSISSL VHLYSITYMH EDPHSPRFMC YLSIPTFFMP MLVTGDNSLQ
201: LFLGWEGVGL ASYLLINFWF TRLQADKAAT KAMPVNRVGD FGLALGISGR FTLFQTVDFS TIFACASAPR NSWISCNIRL NAYTLICILL FIGAVGKSAQ
301: IGSHTRSPDA MEARCSPLFE YPPTALIVIT SAGAMTSFLA ATTGILQNDL KRVIAYSTCS QLGYMIFACG ISNYSVSIFH LMNHAFFKAL LFLSAGSVIH
401: AMSDEQDMRK MGGLASSFPF TYAMMLIGSL SLIGFPFPTG FYSKDVILEL AYTKYTFSGN FAFWLGSVSV LFTSYYSFRL LFLTFLVPTN SFGRDRFKCH
501: DAPIPMAIPS ILLAIGSLFV GYLAKV

Best Arabidopsis Sequence Match ( ATMG00513.1 )
(BLAST)

001: MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS
101: ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR
201: ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AK

Arabidopsis Description

NAD5ANADH dehydrogenase 5A [Source:TAIR;Acc:ATMG00513]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.