Factsheet for GRMZM5G834128_P01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

plastid: 23198870
plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G181300.1	Wheat	golgi	70.39	97.14
ATMG00513.1	Thale cress	extracellular, plasma membrane, vacuole	93.79	93.98
PGSC0003DMT400002438	Potato	endoplasmic reticulum	29.61	91.08
KRG88442	Soybean	cytosol, mitochondrion, vacuole	41.82	86.7
Solyc03g061580.1.1	Tomato	plastid	15.73	86.36
PGSC0003DMT400074648	Potato	endoplasmic reticulum	29.61	85.12
HORVU3Hr1G045020.1	Barley	endoplasmic reticulum	28.36	77.84
CDY45521	Canola	endoplasmic reticulum	78.05	72.22
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	76.4	70.15
KXG30817	Sorghum	plastid	13.04	66.32
KRH12694	Soybean	peroxisome, plasma membrane, plastid	42.86	56.56
KRH12696	Soybean	endoplasmic reticulum	43.06	54.31
GRMZM5G894515_P01	Maize	plastid	39.34	25.75

Protein Annotations

MapMan:2.4.1.3.6	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0006139	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0042773	GO:GO:0055114	EnsemblPlantsGene:GRMZM5G834128
EnsemblPlants:GRMZM5G834128_P01	EnsemblPlants:GRMZM5G834128_T01	InterPro:NADHpl_OxRdtase_5	InterPro:NADHpl_OxRdtase_5_subgr	InterPro:ND/Mrp_mem	PFAM:PF00361
PFAM:PF00662	PRINTS:PR01434	PRINTS:PR01435	PANTHER:PTHR42829	PANTHER:PTHR42829:SF2	InterPro:Proton_antipo_N
TIGRFAMs:TIGR01974	TMHMM:TMhelix	UniParc:UPI0002207CD1	SEG:seg	:	:

Description

No Description!

Coordinates

chrMt:+:204632..207081

Molecular Weight (calculated)

53206.0 Da

IEP (calculated)

7.182

GRAVY (calculated)

0.864

Length

483 amino acids

Sequence
(BLAST)

001: MYLLIVFLPL LGSSVAGFFG RFLGSEGTAI MTTTCVSFSS ILSLIAFYEV ALGASACYLR IAPWISSEMF DASWGFFFDS LTVVMLIVVT FISSLVHLYS
101: ISYMSEDPHS PRFMCYLSIF TFFMLMLVTG DNFLQLFLGW EGVGLASYLL IHFWFTRLQA DKAAIKAMLV NRVGDFGLAL GIFGCFTLFQ TVDFSTIFAC
201: ASAPRNEWIF CNMRFNAITL ICILLFIGAV GKSAQIGLHT WLPDAMEGPT PVSALIHAAT MVTAGVFMIA RCSPLFEYSP TALIVITFAG AMTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLMGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDRLRCHDAP IPMAIPLILL ALGSLFVGYL AKV

Best Arabidopsis Sequence Match ( ATMG00513.1 )
(BLAST)

001: MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS
101: ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR
201: ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
301: GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS
401: KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AK

Arabidopsis Description

NAD5ANADH dehydrogenase 5A [Source:TAIR;Acc:ATMG00513]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.