CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013156_P001	Maize	mitochondrion	87.65	98.65
Zm00001d034244_P001	Maize	extracellular, plasma membrane	86.06	96.86
TraesCS5D01G418000.1	Wheat	mitochondrion	82.07	92.38
TraesCS5B01G413000.1	Wheat	golgi	82.07	92.38
TraesCS5A01G408100.1	Wheat	plastid	82.07	92.38
GSMUA_Achr5P02040_001	Banana	mitochondrion	48.21	85.82
GSMUA_Achr2P13190_001	Banana	mitochondrion	71.71	82.19
KRH21490	Soybean	mitochondrion	72.51	81.98
KRH10832	Soybean	mitochondrion	72.11	81.53
CDY40039	Canola	mitochondrion	70.12	80.37
VIT_03s0063g02550.t01	Wine grape	mitochondrion	71.31	80.27
AT1G16700.1	Thale cress	mitochondrion	70.92	80.18
CDX88498	Canola	mitochondrion	70.92	80.18
AT1G79010.1	Thale cress	mitochondrion	70.52	79.73
CDY57950	Canola	mitochondrion	70.52	79.73
Bra003627.1-P	Field mustard	mitochondrion	70.52	79.73
Bra035083.1-P	Field mustard	mitochondrion	70.52	79.73
CDX87415	Canola	mitochondrion	70.52	79.73
PGSC0003DMT400084285	Potato	mitochondrion	72.51	79.48
CDY35112	Canola	mitochondrion	70.12	79.28
Solyc01g109620.2.1	Tomato	plastid	72.11	79.04
Solyc10g051350.1.1	Tomato	mitochondrion	72.11	79.04
PGSC0003DMT400001914	Potato	mitochondrion	72.11	79.04
KRH60378	Soybean	extracellular	67.33	76.13
HORVU5Hr1G098910.3	Barley	plastid	70.52	59.8
OQU91689	Sorghum	extracellular	9.56	29.27

Protein Annotations

MapMan:2.4.1.2.4	Gene3D:3.30.70.3270	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	UniProt:A0A1B6QHS2	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016651	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	InterPro:Helical_ferredxn	InterPro:IPR009051
InterPro:IPR017896	EnsemblPlants:KXG37457	ProteinID:KXG37457	ProteinID:KXG37457.1	HAMAP:MF_01351	InterPro:NADH_quinone_OxRdtase_chainI
PFAM:PF12838	ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR10849	PANTHER:PTHR10849:SF20	EnsemblPlantsGene:SORBI_3001G073600
SUPFAM:SSF46548	SUPFAM:SSF54862	UniParc:UPI0001C80D78	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:5599178..5602217

Molecular Weight (calculated)

29008.6 Da

IEP (calculated)

6.258

GRAVY (calculated)

-0.553

Length

251 amino acids

Sequence
(BLAST)

001: MAALLARQAA QALRARQTAQ LLPAASAMQG HLRTYMNAGI PKRFKEDEEK EQLAKDVAKD WNAVFERSIN TLFLTEMVRG LMLTLKYFFD RNVTINYPFE
101: KGPLSPRFRG EHALRRYESG EERCIACKLC EALLRWQLLI HNSGYLRKKN HCSHGTNDVQ ICPAQAITIE AEEREDGSRR TTRYDIDMTK CIYCGFCQEA
201: CPVDAIVEGP NFEFATETHE ELLYDKEKLL ENGDRWETEI AENLRSESLY R

Best Arabidopsis Sequence Match ( AT1G79010.1 )
(BLAST)

001: MASILARRSL NTLRARHLVL SGQALQGSHL SRLQSRGISY GSNKDDEEAE QLSKEISKDW NTVFERSINT LFLTEMVRGL SLTLKYFFDP KVTINYPFEK
101: GPLSPRFRGE HALRRYPTGE ERCIACKLCE AVCPAQAITI EAEEREDGSR RTTRYDIDMT KCIYCGFCQE ACPVDAIVEG PNFEFATETH EELLYDKEKL
201: LENGDRWETE IAENLRSESL YR

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42599]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.