CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10832	Soybean	mitochondrion	98.65	98.65
GSMUA_Achr5P02040_001	Banana	mitochondrion	56.31	88.65
VIT_03s0063g02550.t01	Wine grape	mitochondrion	88.29	87.89
KRH60378	Soybean	extracellular	87.84	87.84
AT1G16700.1	Thale cress	mitochondrion	86.49	86.49
Solyc01g109620.2.1	Tomato	plastid	88.74	86.03
PGSC0003DMT400001914	Potato	mitochondrion	88.74	86.03
PGSC0003DMT400084285	Potato	mitochondrion	88.29	85.59
CDY40039	Canola	mitochondrion	84.23	85.39
Solyc10g051350.1.1	Tomato	mitochondrion	87.84	85.15
CDY57950	Canola	mitochondrion	85.14	85.14
CDX88498	Canola	mitochondrion	85.14	85.14
Bra003627.1-P	Field mustard	mitochondrion	85.14	85.14
CDX87415	Canola	mitochondrion	84.68	84.68
Bra035083.1-P	Field mustard	mitochondrion	84.68	84.68
AT1G79010.1	Thale cress	mitochondrion	84.68	84.68
CDY35112	Canola	mitochondrion	84.23	84.23
TraesCS5D01G418000.1	Wheat	mitochondrion	82.88	82.51
TraesCS5B01G413000.1	Wheat	golgi	82.88	82.51
Zm00001d034244_P001	Maize	extracellular, plasma membrane	82.88	82.51
TraesCS5A01G408100.1	Wheat	plastid	82.43	82.06
Zm00001d013156_P001	Maize	mitochondrion	81.98	81.61
GSMUA_Achr2P13190_001	Banana	mitochondrion	80.18	81.28
KXG37457	Sorghum	mitochondrion	81.98	72.51
HORVU5Hr1G098910.3	Barley	plastid	69.82	52.36
KRG99584	Soybean	mitochondrion	10.36	25.0
KRG89704	Soybean	mitochondrion	8.11	18.0

Protein Annotations

EntrezGene:100306645	MapMan:2.4.1.2.4	Gene3D:3.30.70.3270	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	EMBL:ACUP02008356
EnsemblPlantsGene:GLYMA_13G241500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016651	GO:GO:0051539	GO:GO:0055114	UniProt:I1M277
InterPro:IPR017896	ProteinID:KRH21489.1	EnsemblPlants:KRH21490	ProteinID:KRH21490	ProteinID:KRH21490.1	HAMAP:MF_01351
InterPro:NADH_quinone_OxRdtase_chainI	PFAM:PF12838	ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR10849	PANTHER:PTHR10849:SF20
SUPFAM:SSF54862	TIGRFAMs:TIGR01971	UniParc:UPI00023CF6F0	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:-:35148816..35152426

Molecular Weight (calculated)

25618.4 Da

IEP (calculated)

5.257

GRAVY (calculated)

-0.495

Length

222 amino acids

Sequence
(BLAST)

001: MAAILARKSL LALRARQLAV SGQGLHSSQY YGLRLSAHSF STKREDEERE QLAKDISKDW SSVFERSINT LFLTEMVRGL MLTLKYFFET KVTINYPFEK
101: GPLSPRFRGE HALRRYPTGE ERCIACKLCE AICPAQAITI EAEEREDGSR RTTRYDIDMT KCIYCGFCQE ACPVDAIVEG PNFEFATETH EELLYDKEKL
201: LENGDRWETE IAENLRSESL YR

Best Arabidopsis Sequence Match ( AT1G16700.1 )
(BLAST)

001: MASLLARRSF SALRARHLAF SGQGLQGSHL CGLQSRAISY GSNKDDEEAE QLAKEISKDW STVFERSMNT LFLTEMVRGL SLTLKYFFDP KVTINYPFEK
101: GPLSPRFRGE HALRRYPTGE ERCIACKLCE AVCPAQAITI EAEEREDGSR RTTRYDIDMT KCIYCGFCQE ACPVDAIVEG PNFEFATETH EELLYDKEKL
201: LENGDRWETE IAENLRSESL YR

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FX83]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.