CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35112	Canola	mitochondrion	99.09	97.75
AT1G16700.1	Thale cress	mitochondrion	96.35	95.05
CDX88498	Canola	mitochondrion	94.98	93.69
CDX87415	Canola	mitochondrion	94.52	93.24
CDY57950	Canola	mitochondrion	94.52	93.24
GSMUA_Achr5P02040_001	Banana	mitochondrion	55.25	85.82
KRH10832	Soybean	mitochondrion	86.3	85.14
KRH21490	Soybean	mitochondrion	85.39	84.23
Solyc01g109620.2.1	Tomato	plastid	84.93	81.22
PGSC0003DMT400001914	Potato	mitochondrion	84.93	81.22
GSMUA_Achr2P13190_001	Banana	mitochondrion	80.82	80.82
PGSC0003DMT400084285	Potato	mitochondrion	84.47	80.79
Solyc10g051350.1.1	Tomato	mitochondrion	84.47	80.79
TraesCS5A01G408100.1	Wheat	plastid	81.74	80.27
TraesCS5B01G413000.1	Wheat	golgi	81.74	80.27
TraesCS5D01G418000.1	Wheat	mitochondrion	81.74	80.27
VIT_03s0063g02550.t01	Wine grape	mitochondrion	81.74	80.27
KRH60378	Soybean	extracellular	81.28	80.18
Zm00001d013156_P001	Maize	mitochondrion	81.28	79.82
Zm00001d034244_P001	Maize	extracellular, plasma membrane	80.37	78.92
KXG37457	Sorghum	mitochondrion	80.37	70.12
HORVU5Hr1G098910.3	Barley	plastid	68.95	51.01
CDX95228	Canola	mitochondrion	20.55	26.95
CDY03035	Canola	mitochondrion	20.55	26.95
CDY21197	Canola	mitochondrion, plastid	20.55	26.95
CDY19662	Canola	mitochondrion	20.55	26.95

Protein Annotations

MapMan:2.4.1.2.4	Gene3D:3.30.70.3270	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	GO:A0A078HRZ1	UniProt:A0A078HRZ1
EnsemblPlants:CDY40039	ProteinID:CDY40039	ProteinID:CDY40039.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016651	GO:GO:0051539
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00068942001	InterPro:IPR017896	HAMAP:MF_01351	InterPro:NADH_quinone_OxRdtase_chainI	PFAM:PF12838
ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR10849	PANTHER:PTHR10849:SF20	SUPFAM:SSF54862	TIGRFAMs:TIGR01971
UniParc:UPI0004EAE976	SEG:seg	:	:	:	:

Description

BnaC05g12760DBnaC05g12760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRZ1]

Coordinates

chrLK032462:-:201197..204006

Molecular Weight (calculated)

25095.7 Da

IEP (calculated)

4.960

GRAVY (calculated)

-0.521

Length

219 amino acids

Sequence
(BLAST)

001: MASLLARRSL NALRARHLVF SGQGPHLSAL QSRAISYGTN KDDEEAEQLA KEISKDWSTV FERSMNTLFL TEMVRGLSLT LKYFFDPKVT INYPFEKGPL
101: SPRFRGEHAL RRYPTGEERC IACKLCEAVC PAQAITIEAE EREDGSRRTT RYDIDMTKCI YCGFCQEACP VDAIVEGPNF EFATETHEEL LYDKEKLLEN
201: GDRWETEIAE NLKSESLYR

Best Arabidopsis Sequence Match ( AT1G16700.1 )
(BLAST)

001: MASLLARRSF SALRARHLAF SGQGLQGSHL CGLQSRAISY GSNKDDEEAE QLAKEISKDW STVFERSMNT LFLTEMVRGL SLTLKYFFDP KVTINYPFEK
101: GPLSPRFRGE HALRRYPTGE ERCIACKLCE AVCPAQAITI EAEEREDGSR RTTRYDIDMT KCIYCGFCQE ACPVDAIVEG PNFEFATETH EELLYDKEKL
201: LENGDRWETE IAENLRSESL YR

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FX83]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.