Factsheet for Solyc10g051350.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400084285	Potato	mitochondrion	99.13	99.13
Solyc01g109620.2.1	Tomato	plastid	96.07	96.07
KRH21490	Soybean	mitochondrion	85.15	87.84
KRH10832	Soybean	mitochondrion	84.72	87.39
GSMUA_Achr5P02040_001	Banana	mitochondrion	53.71	87.23
VIT_03s0063g02550.t01	Wine grape	mitochondrion	83.41	85.65
AT1G79010.1	Thale cress	mitochondrion	82.1	84.68
CDY40039	Canola	mitochondrion	80.79	84.47
CDX88498	Canola	mitochondrion	81.66	84.23
CDX87415	Canola	mitochondrion	81.22	83.78
Bra035083.1-P	Field mustard	mitochondrion	81.22	83.78
CDY57950	Canola	mitochondrion	80.79	83.33
Bra003627.1-P	Field mustard	mitochondrion	80.79	83.33
CDY35112	Canola	mitochondrion	79.91	82.43
AT1G16700.1	Thale cress	mitochondrion	79.91	82.43
Zm00001d034244_P001	Maize	extracellular, plasma membrane	79.91	82.06
TraesCS5D01G418000.1	Wheat	mitochondrion	79.91	82.06
TraesCS5B01G413000.1	Wheat	golgi	79.91	82.06
TraesCS5A01G408100.1	Wheat	plastid	79.91	82.06
GSMUA_Achr2P13190_001	Banana	mitochondrion	78.17	81.74
Zm00001d013156_P001	Maize	mitochondrion	79.48	81.61
KRH60378	Soybean	extracellular	78.6	81.08
KXG37457	Sorghum	mitochondrion	79.04	72.11
HORVU5Hr1G098910.3	Barley	plastid	69.43	53.72
Solyc11g021220.1.1	Tomato	plastid	17.9	24.55
Solyc02g011780.1.1	Tomato	nucleus	12.66	20.28
Solyc01g086880.1.1	Tomato	extracellular	8.73	14.93

Protein Annotations

MapMan:2.4.1.2.4	Gene3D:3.30.70.3270	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016651
GO:GO:0051539	GO:GO:0055114	InterPro:IPR017896	UniProt:K4D0T7	HAMAP:MF_01351	InterPro:NADH_quinone_OxRdtase_chainI
PFAM:PF12838	ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR10849	PANTHER:PTHR10849:SF20	SUPFAM:SSF54862
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc10g051350.1	EnsemblPlants:Solyc10g051350.1.1	TIGRFAMs:TIGR01971	UniParc:UPI000276A6E2	SEG:seg

Description

No Description!

Coordinates

chr10:-:51979490..51984107

Molecular Weight (calculated)

26309.2 Da

IEP (calculated)

5.115

GRAVY (calculated)

-0.494

Length

229 amino acids

Sequence
(BLAST)

001: MAAILARKSL SALLSRQLVL AGHTIEGTNG YSRTLLGTRS FATKHSFSTD KDDEEREQLA KELSKDWNSV FERSINTLFL TEMVRGLMLT LKYFFEKKVT
101: INYPFEKGPL SPRFRGEHAL RRYATGEERC IACKLCEAIC PAQAITIEAE EREDGSRRTT RYDIDMTKCI YCGFCQEACP VDAIVEGPNF EFATETHEEL
201: LYDKEKLLEN GDRWETEIAE NLRSESLYR

Best Arabidopsis Sequence Match ( AT1G79010.1 )
(BLAST)

001: MASILARRSL NTLRARHLVL SGQALQGSHL SRLQSRGISY GSNKDDEEAE QLSKEISKDW NTVFERSINT LFLTEMVRGL SLTLKYFFDP KVTINYPFEK
101: GPLSPRFRGE HALRRYPTGE ERCIACKLCE AVCPAQAITI EAEEREDGSR RTTRYDIDMT KCIYCGFCQE ACPVDAIVEG PNFEFATETH EELLYDKEKL
201: LENGDRWETE IAENLRSESL YR

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42599]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.