Factsheet for VIT_03s0063g02550.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21490	Soybean	mitochondrion	87.89	88.29
KRH10832	Soybean	mitochondrion	87.0	87.39
Solyc01g109620.2.1	Tomato	plastid	88.34	86.03
PGSC0003DMT400001914	Potato	mitochondrion	88.34	86.03
GSMUA_Achr5P02040_001	Banana	mitochondrion	54.26	85.82
PGSC0003DMT400084285	Potato	mitochondrion	86.55	84.28
Solyc10g051350.1.1	Tomato	mitochondrion	85.65	83.41
AT1G79010.1	Thale cress	mitochondrion	82.96	83.33
CDY57950	Canola	mitochondrion	82.96	83.33
CDX88498	Canola	mitochondrion	82.96	83.33
Bra003627.1-P	Field mustard	mitochondrion	82.96	83.33
AT1G16700.1	Thale cress	mitochondrion	82.51	82.88
CDX87415	Canola	mitochondrion	82.51	82.88
Bra035083.1-P	Field mustard	mitochondrion	82.51	82.88
CDY40039	Canola	mitochondrion	80.27	81.74
CDY35112	Canola	mitochondrion	80.27	80.63
Zm00001d013156_P001	Maize	mitochondrion	80.27	80.27
Zm00001d034244_P001	Maize	extracellular, plasma membrane	79.37	79.37
GSMUA_Achr2P13190_001	Banana	mitochondrion	77.58	79.0
TraesCS5B01G413000.1	Wheat	golgi	78.92	78.92
TraesCS5D01G418000.1	Wheat	mitochondrion	78.92	78.92
TraesCS5A01G408100.1	Wheat	plastid	78.48	78.48
KRH60378	Soybean	extracellular	78.03	78.38
KXG37457	Sorghum	mitochondrion	80.27	71.31
HORVU5Hr1G098910.3	Barley	plastid	68.61	51.69

Protein Annotations

EntrezGene:100853527	wikigene:100853527	MapMan:2.4.1.2.4	Gene3D:3.30.70.3270	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS
ProteinID:CBI32588	ProteinID:CBI32588.3	UniProt:D7TQ15	EMBL:FN596006	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016651
GO:GO:0051539	GO:GO:0055114	InterPro:IPR017896	EntrezGene:LOC100853527	wikigene:LOC100853527	HAMAP:MF_01351
InterPro:NADH_quinone_OxRdtase_chainI	PFAM:PF12838	ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR10849	PANTHER:PTHR10849:SF20
SUPFAM:SSF54862	TIGR:TC52761	TIGRFAMs:TIGR01971	UniParc:UPI00015C919D	ArrayExpress:VIT_03s0063g02550	EnsemblPlantsGene:VIT_03s0063g02550
EnsemblPlants:VIT_03s0063g02550.t01	RefSeq:XP_003631654	RefSeq:XP_003631654.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:+:5783133..5789723

Molecular Weight (calculated)

25649.4 Da

IEP (calculated)

5.226

GRAVY (calculated)

-0.517

Length

223 amino acids

Sequence
(BLAST)

001: MAAAILARKS LLALRSRQLA VAGPALQGSN PNGHRYITHS FFSKKDDEER EQLAKDMSKD WNSVFNHSIN TLFLTEMVRG LMLTLKYFFD TQVTINYPFE
101: KGPLSPRFRG EHALRRYPTG EERCIACKLC EAICPAQAIT IEAEEREDGS RRTTRYDIDM TKCIYCGFCQ EACPVDAIVE GPNFEFTTET HEELLYDKEK
201: LLENGDRWET EIAENLRAES LYR

Best Arabidopsis Sequence Match ( AT1G79010.1 )
(BLAST)

001: MASILARRSL NTLRARHLVL SGQALQGSHL SRLQSRGISY GSNKDDEEAE QLSKEISKDW NTVFERSINT LFLTEMVRGL SLTLKYFFDP KVTINYPFEK
101: GPLSPRFRGE HALRRYPTGE ERCIACKLCE AVCPAQAITI EAEEREDGSR RTTRYDIDMT KCIYCGFCQE ACPVDAIVEG PNFEFATETH EELLYDKEKL
201: LENGDRWETE IAENLRSESL YR

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42599]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.