Factsheet for GSMUA_Achr5P02040_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13190_001	Banana	mitochondrion	88.65	57.08
KRH21490	Soybean	mitochondrion	88.65	56.31
KRH10832	Soybean	mitochondrion	88.65	56.31
KRH60378	Soybean	extracellular	87.23	55.41
CDY40039	Canola	mitochondrion	85.82	55.25
TraesCS5D01G418000.1	Wheat	mitochondrion	87.23	55.16
TraesCS5B01G413000.1	Wheat	golgi	87.23	55.16
TraesCS5A01G408100.1	Wheat	plastid	87.23	55.16
Zm00001d034244_P001	Maize	extracellular, plasma membrane	86.52	54.71
AT1G16700.1	Thale cress	mitochondrion	85.82	54.5
CDY35112	Canola	mitochondrion	85.82	54.5
CDX88498	Canola	mitochondrion	85.82	54.5
CDX87415	Canola	mitochondrion	85.82	54.5
AT1G79010.1	Thale cress	mitochondrion	85.82	54.5
CDY57950	Canola	mitochondrion	85.82	54.5
Bra003627.1-P	Field mustard	mitochondrion	85.82	54.5
Bra035083.1-P	Field mustard	mitochondrion	85.82	54.5
Zm00001d013156_P001	Maize	mitochondrion	85.82	54.26
VIT_03s0063g02550.t01	Wine grape	mitochondrion	85.82	54.26
PGSC0003DMT400084285	Potato	mitochondrion	87.23	53.71
Solyc10g051350.1.1	Tomato	mitochondrion	87.23	53.71
Solyc01g109620.2.1	Tomato	plastid	87.23	53.71
PGSC0003DMT400001914	Potato	mitochondrion	87.23	53.71
KXG37457	Sorghum	mitochondrion	85.82	48.21
HORVU5Hr1G098910.3	Barley	plastid	83.69	39.86
GSMUA_AchrUn_...	Banana	mitochondrion	21.99	25.41

Protein Annotations

MapMan:2.4.1.2.4	Gene3D:3.30.70.3270	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016651
GO:GO:0051539	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G02040_001	EnsemblPlants:GSMUA_Achr5P02040_001	EnsemblPlants:GSMUA_Achr5T02040_001	InterPro:IPR017896
UniProt:M0SUY3	HAMAP:MF_01351	InterPro:NADH_quinone_OxRdtase_chainI	PFAM:PF12838	ScanProsite:PS00198	PFscan:PS51379
PANTHER:PTHR10849	PANTHER:PTHR10849:SF20	SUPFAM:SSF54862	TIGRFAMs:TIGR01971	UniParc:UPI000296FA5D	SEG:seg

Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr5G02040_001]

Coordinates

chr5:-:1293465..1294569

Molecular Weight (calculated)

15988.0 Da

IEP (calculated)

4.563

GRAVY (calculated)

-0.377

Length

141 amino acids

Sequence
(BLAST)

001: MVHGLMLTLK YFFERKVTIN YPFEKGPLSP CFRGEHALRR YPTGEERCIA CKLCEAICPA QAITIEAEEG EDGSRRTTRY DIDMAKCIYC GFCQESCPVD
101: AIVEGPNFEF ATETHEELLY DKEKLLENGD RLENSATTSV A

Best Arabidopsis Sequence Match ( AT1G79010.1 )
(BLAST)

001: MASILARRSL NTLRARHLVL SGQALQGSHL SRLQSRGISY GSNKDDEEAE QLSKEISKDW NTVFERSINT LFLTEMVRGL SLTLKYFFDP KVTINYPFEK
101: GPLSPRFRGE HALRRYPTGE ERCIACKLCE AVCPAQAITI EAEEREDGSR RTTRYDIDMT KCIYCGFCQE ACPVDAIVEG PNFEFATETH EELLYDKEKL
201: LENGDRWETE IAENLRSESL YR

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42599]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.