Factsheet for AT1G79010.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88498	Canola	mitochondrion	96.85	96.85
Bra035083.1-P	Field mustard	mitochondrion	96.4	96.4
CDX87415	Canola	mitochondrion	96.4	96.4
Bra003627.1-P	Field mustard	mitochondrion	95.05	95.05
CDY57950	Canola	mitochondrion	95.05	95.05
AT1G16700.1	Thale cress	mitochondrion	94.14	94.14
GSMUA_Achr5P02040_001	Banana	mitochondrion	54.5	85.82
KRH10832	Soybean	mitochondrion	85.59	85.59
KRH21490	Soybean	mitochondrion	84.68	84.68
Solyc01g109620.2.1	Tomato	plastid	85.59	82.97
PGSC0003DMT400001914	Potato	mitochondrion	85.59	82.97
VIT_03s0063g02550.t01	Wine grape	mitochondrion	83.33	82.96
Solyc10g051350.1.1	Tomato	mitochondrion	84.68	82.1
PGSC0003DMT400084285	Potato	mitochondrion	84.68	82.1
GSMUA_Achr2P13190_001	Banana	mitochondrion	80.63	81.74
Zm00001d013156_P001	Maize	mitochondrion	80.63	80.27
KRH60378	Soybean	extracellular	79.28	79.28
Zm00001d034244_P001	Maize	extracellular, plasma membrane	79.28	78.92
TraesCS5A01G408100.1	Wheat	plastid	78.83	78.48
TraesCS5B01G413000.1	Wheat	golgi	78.83	78.48
TraesCS5D01G418000.1	Wheat	mitochondrion	78.83	78.48
KXG37457	Sorghum	mitochondrion	79.73	70.52
HORVU5Hr1G098910.3	Barley	plastid	68.02	51.01
ATCG01090.1	Thale cress	mitochondrion	20.27	26.16

Protein Annotations

MapMan:2.4.1.2.4	Gene3D:3.30.70.3270	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	EntrezGene:838239	EntrezGene:844242
ProteinID:AAC17054.1	ProteinID:AAG10813.1	ProteinID:AEE29484.1	ProteinID:AEE36193.1	EMBL:AK226368	ArrayExpress:AT1G79010
EnsemblPlantsGene:AT1G79010	RefSeq:AT1G79010	TAIR:AT1G79010	RefSeq:AT1G79010-TAIR-G	EnsemblPlants:AT1G79010.1	TAIR:AT1G79010.1
EMBL:AY048241	EMBL:AY059922	EMBL:AY072622	EMBL:AY081631	EMBL:AY085448	EMBL:AY088308
Unigene:At.24660	GO:GO:0003674	GO:GO:0003824	GO:GO:0003954	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0016651	GO:GO:0046872
GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	GO:GO:0070469	InterPro:IPR017896	HAMAP:MF_01351
InterPro:NADH_quinone_OxRdtase_chainI	RefSeq:NP_173114.1	RefSeq:NP_178022.1	ProteinID:OAP14892.1	PFAM:PF12838	PO:PO:0000293
PO:PO:0001016	PO:PO:0001017	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00198	PFscan:PS51379
PANTHER:PTHR10849	PANTHER:PTHR10849:SF20	UniProt:Q42599	SUPFAM:SSF54862	TIGRFAMs:TIGR01971	UniParc:UPI0000000BAE
EMBL:X84318	SEG:seg	:	:	:	:

Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42599]

Coordinates

chr1:-:29724796..29727028

Molecular Weight (calculated)

25504.1 Da

IEP (calculated)

5.089

GRAVY (calculated)

-0.559

Length

222 amino acids

Sequence
(BLAST)

001: MASILARRSL NTLRARHLVL SGQALQGSHL SRLQSRGISY GSNKDDEEAE QLSKEISKDW NTVFERSINT LFLTEMVRGL SLTLKYFFDP KVTINYPFEK
101: GPLSPRFRGE HALRRYPTGE ERCIACKLCE AVCPAQAITI EAEEREDGSR RTTRYDIDMT KCIYCGFCQE ACPVDAIVEG PNFEFATETH EELLYDKEKL
201: LENGDRWETE IAENLRSESL YR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.