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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX95228 Canola mitochondrion 96.51 99.4
CDY03035 Canola mitochondrion 96.51 99.4
CDY19662 Canola mitochondrion 96.51 99.4
CDY21197 Canola mitochondrion, plastid 96.51 99.4
Solyc11g021220.1.1 Tomato plastid 84.88 87.43
GSMUA_AchrUn_... Banana mitochondrion 59.3 83.61
HORVU2Hr1G021310.1 Barley cytosol, mitochondrion 36.63 80.77
TraesCS1B01G105900.1 Wheat mitochondrion 24.42 79.25
CAA33909 Rice mitochondrion 78.49 75.84
GRMZM5G866223_P01 Maize plastid 79.07 75.56
TraesCS5B01G250600.1 Wheat mitochondrion 54.07 74.4
HORVU7Hr1G107870.1 Barley mitochondrion 77.33 73.89
AGP50809 Barley plastid 77.33 73.89
HORVU3Hr1G066350.1 Barley mitochondrion 77.33 73.89
HORVU1Hr1G048100.1 Barley mitochondrion 77.33 73.89
Bra041055.1-P Field mustard mitochondrion 73.84 73.84
HORVU5Hr1G064760.1 Barley mitochondrion 76.74 73.33
OQU91689 Sorghum extracellular 34.88 73.17
TraesCS2D01G243500.1 Wheat plastid 76.74 72.53
TraesCSU01G221700.1 Wheat mitochondrion 76.74 72.53
TraesCS3A01G430200.1 Wheat mitochondrion 75.58 71.82
TraesCS1B01G405600.1 Wheat mitochondrion 74.42 71.11
TraesCS3B01G189100.1 Wheat mitochondrion 75.0 70.88
TraesCS4A01G141300.1 Wheat cytosol, extracellular, mitochondrion 72.09 68.13
TraesCS4D01G162200.1 Wheat mitochondrion 69.77 66.67
TraesCS7B01G395600.1 Wheat mitochondrion 42.44 66.36
HORVU0Hr1G025040.1 Barley mitochondrion 43.6 61.48
HORVU5Hr1G005450.1 Barley cytosol 12.79 59.46
HORVU2Hr1G030360.1 Barley cytosol 37.21 57.14
HORVU6Hr1G087860.1 Barley mitochondrion 54.65 52.22
AT1G79010.1 Thale cress mitochondrion 26.16 20.27
AT1G16700.1 Thale cress mitochondrion 26.16 20.27
Protein Annotations
MapMan:1.1.8.1.2.2Gene3D:3.30.70.3270InterPro:4Fe4S_Fe-S-bdInterPro:4Fe4S_Fe_S_CSEntrezGene:844806UniProt:A0A1B1W503
ProteinID:ANW47843.1ArrayExpress:ATCG01090EnsemblPlantsGene:ATCG01090RefSeq:ATCG01090TAIR:ATCG01090RefSeq:ATCG01090-TAIR-G
EnsemblPlants:ATCG01090.1TAIR:ATCG01090.1ProteinID:BAA84441.1GO:GO:0003674GO:GO:0003824GO:GO:0003959
GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006091GO:GO:0008137GO:GO:0008150GO:GO:0008152GO:GO:0009507GO:GO:0009535
GO:GO:0009536GO:GO:0009579GO:GO:0009987GO:GO:0015979GO:GO:0016020GO:GO:0016491
GO:GO:0016651GO:GO:0016655GO:GO:0019684GO:GO:0046872GO:GO:0048038GO:GO:0051536
GO:GO:0051539GO:GO:0055114InterPro:IPR017896HAMAP:MF_01351InterPro:NADH_plast_OxRdtase_su_IInterPro:NADH_quinone_OxRdtase_chainI
Symbol:NDHIRefSeq:NP_051113.1UniProt:P56755PFAM:PF13187ScanProsite:PS00198PFscan:PS51379
PANTHER:PTHR10849PANTHER:PTHR10849:SF23SUPFAM:SSF54862TIGRFAMs:TIGR00403TIGRFAMs:TIGR01971UniParc:UPI0000130940
Description
NDHINAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56755]
Coordinates
chrPt:-:119244..119762
Molecular Weight (calculated)
20087.5 Da
IEP (calculated)
7.632
GRAVY (calculated)
-0.131
Length
172 amino acids
Sequence
(BLAST)
001: MLPMITGFMN YGQQTLRAAR YIGQGFMITL SHTNRLPVTI QYPYEKLITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWKLETNIR KKRLLNYSID
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.