Factsheet for HORVU5Hr1G064760.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AGP50809	Barley	plastid	98.89	98.89
HORVU7Hr1G107870.1	Barley	mitochondrion	98.89	98.89
HORVU3Hr1G066350.1	Barley	mitochondrion	98.89	98.89
HORVU1Hr1G048100.1	Barley	mitochondrion	98.89	98.89
HORVU2Hr1G021310.1	Barley	cytosol, mitochondrion	42.78	98.72
Bra041055.1-P	Field mustard	mitochondrion	93.89	98.26
TraesCS1B01G405600.1	Wheat	mitochondrion	95.0	95.0
CAA33909	Rice	mitochondrion	92.78	93.82
GRMZM5G866223_P01	Maize	plastid	92.78	92.78
GSMUA_AchrUn_...	Banana	mitochondrion	57.22	84.43
CDY21197	Canola	mitochondrion, plastid	73.33	79.04
CDY19662	Canola	mitochondrion	73.33	79.04
CDY03035	Canola	mitochondrion	73.33	79.04
CDX95228	Canola	mitochondrion	73.33	79.04
ATCG01090.1	Thale cress	mitochondrion	73.33	76.74
HORVU2Hr1G030360.1	Barley	cytosol	47.22	75.89
OQU91689	Sorghum	extracellular	33.89	74.39
HORVU0Hr1G025040.1	Barley	mitochondrion	49.44	72.95
KRG99584	Soybean	mitochondrion	36.67	71.74
HORVU6Hr1G087860.1	Barley	mitochondrion	69.44	69.44
HORVU5Hr1G005450.1	Barley	cytosol	13.33	64.86
HORVU5Hr1G098910.3	Barley	plastid	22.78	13.85

Protein Annotations

MapMan:1.1.8.1.2.2	Gene3D:3.30.70.3270	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	UniProt:A0A287RJS7	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	GO:GO:0016491	GO:GO:0016651	GO:GO:0046872
GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G064760	EnsemblPlants:HORVU5Hr1G064760.1	InterPro:IPR017896
InterPro:NADH_plast_OxRdtase_su_I	InterPro:NADH_quinone_OxRdtase_chainI	PFAM:PF13237	ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR10849
PANTHER:PTHR10849:SF23	SUPFAM:SSF54862	TIGRFAMs:TIGR00403	TIGRFAMs:TIGR01971	UniParc:UPI000B483177	SEG:seg

Description

NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A287RJS7]

Coordinates

chrchr5H:-:498701903..498702445

Molecular Weight (calculated)

21007.1 Da

IEP (calculated)

6.337

GRAVY (calculated)

-0.299

Length

180 amino acids

Sequence
(BLAST)

001: MFPMVTGFMS YGQQTIRATR YIGQSFITTL SHTNRLPITI HYPYEKSITP EHFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWRFENDIK RKQLLNYSID
101: FGVCIFCGNC VEYCPTSCLS MTEEYELSTY DRHELNYNQI ALSRLPISIM GDYTIQTIRN SSESKINEEK SSNSRTITDY

Best Arabidopsis Sequence Match ( ATCG01090.1 )
(BLAST)

001: MLPMITGFMN YGQQTLRAAR YIGQGFMITL SHTNRLPVTI QYPYEKLITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWKLETNIR KKRLLNYSID
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI

Arabidopsis Description

NDHINAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56755]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.