Factsheet for TraesCS1B01G405600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041055.1-P	Field mustard	mitochondrion	91.11	95.35
HORVU5Hr1G064760.1	Barley	mitochondrion	95.0	95.0
TraesCS3B01G189100.1	Wheat	mitochondrion	93.33	92.31
CAA33909	Rice	mitochondrion	90.0	91.01
TraesCS1B01G105900.1	Wheat	mitochondrion	26.67	90.57
GRMZM5G866223_P01	Maize	plastid	90.0	90.0
TraesCS5B01G250600.1	Wheat	mitochondrion	62.22	89.6
GSMUA_AchrUn_...	Banana	mitochondrion	55.0	81.15
CDX95228	Canola	mitochondrion	71.11	76.65
CDY03035	Canola	mitochondrion	71.11	76.65
CDY19662	Canola	mitochondrion	71.11	76.65
CDY21197	Canola	mitochondrion, plastid	71.11	76.65
TraesCS7B01G395600.1	Wheat	mitochondrion	46.67	76.36
ATCG01090.1	Thale cress	mitochondrion	71.11	74.42
OQU91689	Sorghum	extracellular	32.78	71.95
KRG99584	Soybean	mitochondrion	36.67	71.74
Solyc01g086880.1.1	Tomato	extracellular	32.78	44.03
TraesCS5B01G413000.1	Wheat	golgi	22.78	18.39

Protein Annotations

MapMan:1.1.8.1.2.2	Gene3D:3.30.70.3270	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016651	GO:GO:0051539	GO:GO:0055114	InterPro:IPR017896	InterPro:NADH_plast_OxRdtase_su_I	InterPro:NADH_quinone_OxRdtase_chainI
PFAM:PF13237	ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR10849	PANTHER:PTHR10849:SF23	SUPFAM:SSF54862
TIGRFAMs:TIGR00403	TIGRFAMs:TIGR01971	EnsemblPlantsGene:TraesCS1B01G405600	EnsemblPlants:TraesCS1B01G405600.1	SEG:seg	:

Description

No Description!

Coordinates

chr1B:-:633728127..633728669

Molecular Weight (calculated)

21072.3 Da

IEP (calculated)

7.714

GRAVY (calculated)

-0.328

Length

180 amino acids

Sequence
(BLAST)

001: MFPMVTGFMS YGQQTIRATR YIGQSFINTL SHTNRLPITI HYPYEKSIKP EHFRGQIHFE FDKCIACEVC VRVCPIDLPV VDLRFEKDIK RKQLLNYSID
101: FGVCIFRGNC VEYCPTSCLS MTEEYELSTY DRHELNYNQI ALSRLPLSIM GDYTIQTIRN SFESKINKEK SSNSRTITDY

Best Arabidopsis Sequence Match ( ATCG01090.1 )
(BLAST)

001: MLPMITGFMN YGQQTLRAAR YIGQGFMITL SHTNRLPVTI QYPYEKLITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWKLETNIR KKRLLNYSID
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI

Arabidopsis Description

NDHINAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56755]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.