Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- extracellular 5
- nucleus 1
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G005450.1 | Barley | cytosol | 11.94 | 43.24 |
| Bra041055.1-P | Field mustard | mitochondrion | 44.78 | 34.88 |
| Solyc11g021220.1.1 | Tomato | plastid | 42.54 | 34.13 |
| CAA33909 | Rice | mitochondrion | 44.03 | 33.15 |
| TraesCSU01G221700.1 | Wheat | mitochondrion | 44.78 | 32.97 |
| TraesCS3B01G189100.1 | Wheat | mitochondrion | 44.78 | 32.97 |
| TraesCS2D01G243500.1 | Wheat | plastid | 44.78 | 32.97 |
| TraesCS1B01G405600.1 | Wheat | mitochondrion | 44.03 | 32.78 |
| GRMZM5G866223_P01 | Maize | plastid | 44.03 | 32.78 |
| TraesCS3A01G430200.1 | Wheat | mitochondrion | 43.28 | 32.04 |
| TraesCS4D01G162200.1 | Wheat | mitochondrion | 42.54 | 31.67 |
| TraesCS4A01G141300.1 | Wheat | cytosol, extracellular, mitochondrion | 41.79 | 30.77 |
| TraesCS5B01G250600.1 | Wheat | mitochondrion | 27.61 | 29.6 |
| OQU91689 | Sorghum | extracellular | 15.67 | 25.61 |
| Solyc02g011780.1.1 | Tomato | nucleus | 26.87 | 25.17 |
| TraesCS7B01G395600.1 | Wheat | mitochondrion | 14.93 | 18.18 |
| TraesCS1B01G105900.1 | Wheat | mitochondrion | 5.22 | 13.21 |
| Solyc10g051350.1.1 | Tomato | mitochondrion | 14.93 | 8.73 |
| Solyc01g109620.2.1 | Tomato | plastid | 14.93 | 8.73 |
Protein Annotations
| EnsemblPlants:Solyc01g086880.1.1 | EnsemblPlantsGene:Solyc01g086880.1 | Gene3D:3.30.70.3270 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055114 |
| InterPro:NADH_plast_OxRdtase_su_I | PANTHER:PTHR10849 | PANTHER:PTHR10849:SF23 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002762D7E |
| UniProt:K4AY81 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:81802710..81804567
Molecular Weight (calculated)
16086.7 Da
IEP (calculated)
8.106
GRAVY (calculated)
0.166
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIQRKMDQF LLNILSSLLS SMCIYAIKIT LFFNYKQTSL PSPFFDAHLL FVCVCPIDLP VFDWKLESHV RKKRLLNYSI EFGIFIFSGN CVEYYLTNCL
101: PMTEEYELST YDCHKLNYNH LKKFYIFKFY SIYT
101: PMTEEYELST YDCHKLNYNH LKKFYIFKFY SIYT
001: MLPMITGFMN YGQQTLRAAR YIGQGFMITL SHTNRLPVTI QYPYEKLITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWKLETNIR KKRLLNYSID
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI
Arabidopsis Description
NDHINAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56755]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.