Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra041055.1-P | Field mustard | mitochondrion | 91.16 | 95.93 |
| HORVU3Hr1G066350.1 | Barley | mitochondrion | 95.03 | 95.56 |
| TraesCS3B01G189100.1 | Wheat | mitochondrion | 94.48 | 93.96 |
| CAA33909 | Rice | mitochondrion | 90.06 | 91.57 |
| TraesCS4A01G141300.1 | Wheat | cytosol, extracellular, mitochondrion | 91.16 | 90.66 |
| GRMZM5G866223_P01 | Maize | plastid | 90.06 | 90.56 |
| TraesCS4D01G162200.1 | Wheat | mitochondrion | 87.29 | 87.78 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 55.8 | 82.79 |
| CDY21197 | Canola | mitochondrion, plastid | 71.82 | 77.84 |
| CDY19662 | Canola | mitochondrion | 71.82 | 77.84 |
| CDY03035 | Canola | mitochondrion | 71.82 | 77.84 |
| CDX95228 | Canola | mitochondrion | 71.82 | 77.84 |
| OQU91689 | Sorghum | extracellular | 34.25 | 75.61 |
| ATCG01090.1 | Thale cress | mitochondrion | 71.82 | 75.58 |
| KRG99584 | Soybean | mitochondrion | 35.91 | 70.65 |
| Solyc01g086880.1.1 | Tomato | extracellular | 32.04 | 43.28 |
| TraesCS5A01G408100.1 | Wheat | plastid | 23.76 | 19.28 |
Protein Annotations
| MapMan:1.1.8.1.2.2 | Gene3D:3.30.70.3270 | InterPro:4Fe4S_Fe-S-bd | InterPro:4Fe4S_Fe_S_CS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016651 | GO:GO:0051539 | GO:GO:0055114 | InterPro:IPR017896 | InterPro:NADH_plast_OxRdtase_su_I | InterPro:NADH_quinone_OxRdtase_chainI |
| PFAM:PF13237 | ScanProsite:PS00198 | PFscan:PS51379 | PANTHER:PTHR10849 | PANTHER:PTHR10849:SF23 | SUPFAM:SSF54862 |
| TIGRFAMs:TIGR00403 | TIGRFAMs:TIGR01971 | EnsemblPlantsGene:TraesCS3A01G430200 | EnsemblPlants:TraesCS3A01G430200.1 | : | : |
Description
No Description!
Coordinates
chr3A:-:672877698..672878243
Molecular Weight (calculated)
21183.4 Da
IEP (calculated)
7.977
GRAVY (calculated)
-0.355
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMFPMVTGF MSYGQQTIRA TRYIGQSFIT TLSHTNRLPI TIHYPYEKSI TPERFRGRIH FEFDKCIACE VCVRICPIDL PVVDWRFEKD IKRKQLLNYN
101: IDFGVCIFCG NCVEYYPTSC LSMTEEYELS TYDRHELNYN QIALSRLAIS TMGDYTIQTI RNSSQSKINK EKSSNSRTIT D
101: IDFGVCIFCG NCVEYYPTSC LSMTEEYELS TYDRHELNYN QIALSRLAIS TMGDYTIQTI RNSSQSKINK EKSSNSRTIT D
001: MLPMITGFMN YGQQTLRAAR YIGQGFMITL SHTNRLPVTI QYPYEKLITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWKLETNIR KKRLLNYSID
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI
Arabidopsis Description
NDHINAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56755]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.