CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G021310.1	Barley	cytosol, mitochondrion	58.7	69.23
OQU91689	Sorghum	extracellular	60.87	68.29
TraesCS1B01G105900.1	Wheat	mitochondrion	36.96	64.15
GSMUA_AchrUn_...	Banana	mitochondrion	75.0	56.56
TraesCS7B01G395600.1	Wheat	mitochondrion	67.39	56.36
HORVU0Hr1G025040.1	Barley	mitochondrion	69.57	52.46
TraesCS5B01G250600.1	Wheat	mitochondrion	65.22	48.0
KRG89704	Soybean	mitochondrion	50.0	46.0
GRMZM5G866223_P01	Maize	plastid	75.0	38.33
CAA33909	Rice	mitochondrion	73.91	38.2
HORVU1Hr1G048100.1	Barley	mitochondrion	71.74	36.67
HORVU3Hr1G066350.1	Barley	mitochondrion	71.74	36.67
HORVU5Hr1G064760.1	Barley	mitochondrion	71.74	36.67
HORVU7Hr1G107870.1	Barley	mitochondrion	71.74	36.67
TraesCS1B01G405600.1	Wheat	mitochondrion	71.74	36.67
AGP50809	Barley	plastid	71.74	36.67
TraesCSU01G221700.1	Wheat	mitochondrion	71.74	36.26
TraesCS2D01G243500.1	Wheat	plastid	71.74	36.26
TraesCS3A01G430200.1	Wheat	mitochondrion	70.65	35.91
Bra041055.1-P	Field mustard	mitochondrion	66.3	35.47
TraesCS3B01G189100.1	Wheat	mitochondrion	69.57	35.16
TraesCS4D01G162200.1	Wheat	mitochondrion	65.22	33.33
TraesCS4A01G141300.1	Wheat	cytosol, extracellular, mitochondrion	65.22	32.97
Solyc02g011780.1.1	Tomato	nucleus	40.22	25.87
HORVU6Hr1G087860.1	Barley	mitochondrion	34.78	17.78
KRH60378	Soybean	extracellular	25.0	10.36
KRH21490	Soybean	mitochondrion	25.0	10.36
KRH10832	Soybean	mitochondrion	25.0	10.36
HORVU2Hr1G030360.1	Barley	cytosol	6.52	5.36
HORVU5Hr1G005450.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.70.3270	MapMan:35.1	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	EMBL:ACUP02011211	EnsemblPlantsGene:GLYMA_18G155500
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	GO:GO:0016491	GO:GO:0016651	GO:GO:0046872
GO:GO:0048038	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	InterPro:IPR017896	UniProt:K7MSH8
EnsemblPlants:KRG99584	ProteinID:KRG99584	ProteinID:KRG99584.1	InterPro:NADH_plast_OxRdtase_su_I	PFAM:PF00037	ScanProsite:PS00198
PFscan:PS51379	PANTHER:PTHR10849	PANTHER:PTHR10849:SF23	SUPFAM:SSF54862	UniParc:UPI0002961FE4	:

Description

hypothetical protein

Coordinates

chr18:-:33807100..33807378

Molecular Weight (calculated)

10635.9 Da

IEP (calculated)

7.244

GRAVY (calculated)

0.002

Length

92 amino acids

Sequence
(BLAST)

1: MFLMVSGSIN YSQQTVRVAR YTGQGFTITL SHTNRLPVTI QYPYEKIISS ECFRGQIHFE FDKCIACEVC VRVCPIDLPI VDWKLETDIQ NK

Best Arabidopsis Sequence Match ( ATCG01090.1 )
(BLAST)

001: MLPMITGFMN YGQQTLRAAR YIGQGFMITL SHTNRLPVTI QYPYEKLITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWKLETNIR KKRLLNYSID
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI

Arabidopsis Description

NDHINAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56755]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.