CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
mitochondrion 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G021310.1	Barley	cytosol, mitochondrion	74.39	78.21
KRG99584	Soybean	mitochondrion	68.29	60.87
TraesCS7B01G395600.1	Wheat	mitochondrion	69.51	51.82
HORVU0Hr1G025040.1	Barley	mitochondrion	71.95	48.36
TraesCS5B01G250600.1	Wheat	mitochondrion	71.95	47.2
TraesCS1B01G105900.1	Wheat	mitochondrion	30.49	47.17
GSMUA_AchrUn_...	Banana	mitochondrion	68.29	45.9
GRMZM5G866223_P01	Maize	plastid	81.71	37.22
CAA33909	Rice	mitochondrion	80.49	37.08
Bra041055.1-P	Field mustard	mitochondrion	75.61	36.05
CDX95228	Canola	mitochondrion	73.17	35.93
CDY03035	Canola	mitochondrion	73.17	35.93
CDY19662	Canola	mitochondrion	73.17	35.93
CDY21197	Canola	mitochondrion, plastid	73.17	35.93
HORVU1Hr1G048100.1	Barley	mitochondrion	76.83	35.0
HORVU7Hr1G107870.1	Barley	mitochondrion	76.83	35.0
HORVU3Hr1G066350.1	Barley	mitochondrion	76.83	35.0
AGP50809	Barley	plastid	76.83	35.0
ATCG01090.1	Thale cress	mitochondrion	73.17	34.88
TraesCS3B01G189100.1	Wheat	mitochondrion	76.83	34.62
TraesCSU01G221700.1	Wheat	mitochondrion	76.83	34.62
TraesCS2D01G243500.1	Wheat	plastid	76.83	34.62
TraesCS3A01G430200.1	Wheat	mitochondrion	75.61	34.25
HORVU5Hr1G064760.1	Barley	mitochondrion	74.39	33.89
TraesCS4D01G162200.1	Wheat	mitochondrion	73.17	33.33
TraesCS1B01G405600.1	Wheat	mitochondrion	71.95	32.78
TraesCS4A01G141300.1	Wheat	cytosol, extracellular, mitochondrion	71.95	32.42
Solyc11g021220.1.1	Tomato	plastid	65.85	32.34
Solyc02g011780.1.1	Tomato	nucleus	45.12	25.87
Solyc01g086880.1.1	Tomato	extracellular	25.61	15.67
HORVU6Hr1G087860.1	Barley	mitochondrion	28.05	12.78
HORVU2Hr1G030360.1	Barley	cytosol	13.41	9.82
KXG37457	Sorghum	mitochondrion	29.27	9.56
HORVU5Hr1G005450.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.70.3270	MapMan:35.1	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	UniProt:A0A1Z5S781	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0016020	GO:GO:0016491	GO:GO:0016651	GO:GO:0046872	GO:GO:0048038
GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	InterPro:IPR017896	InterPro:NADH_plast_OxRdtase_su_I	EnsemblPlants:OQU91689
ProteinID:OQU91689	ProteinID:OQU91689.1	PFAM:PF00037	ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR10849
PANTHER:PTHR10849:SF23	EnsemblPlantsGene:SORBI_3001G230050	SUPFAM:SSF54862	UniParc:UPI000B8B9BE8	:	:

Description

hypothetical protein

Coordinates

chr1:+:22235702..22237373

Molecular Weight (calculated)

9753.1 Da

IEP (calculated)

9.378

GRAVY (calculated)

-0.113

Length

82 amino acids

Sequence
(BLAST)

1: MKKSLSLLTN VWNFGLIITL SHTNRLPITI HYPYEKSITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPL VDWKFEKDIK RK

Best Arabidopsis Sequence Match ( ATCG01090.1 )
(BLAST)

001: MLPMITGFMN YGQQTLRAAR YIGQGFMITL SHTNRLPVTI QYPYEKLITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWKLETNIR KKRLLNYSID
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI

Arabidopsis Description

NDHINAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56755]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.