Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G243500.1 | Wheat | plastid | 100.0 | 100.0 |
| Bra041055.1-P | Field mustard | mitochondrion | 92.86 | 98.26 |
| AGP50809 | Barley | plastid | 96.7 | 97.78 |
| HORVU1Hr1G048100.1 | Barley | mitochondrion | 96.7 | 97.78 |
| HORVU7Hr1G107870.1 | Barley | mitochondrion | 96.7 | 97.78 |
| CAA33909 | Rice | mitochondrion | 90.66 | 92.7 |
| GRMZM5G866223_P01 | Maize | plastid | 90.66 | 91.67 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 55.49 | 82.79 |
| CDX95228 | Canola | mitochondrion | 72.53 | 79.04 |
| CDY03035 | Canola | mitochondrion | 72.53 | 79.04 |
| CDY19662 | Canola | mitochondrion | 72.53 | 79.04 |
| CDY21197 | Canola | mitochondrion, plastid | 72.53 | 79.04 |
| OQU91689 | Sorghum | extracellular | 34.62 | 76.83 |
| ATCG01090.1 | Thale cress | mitochondrion | 72.53 | 76.74 |
| KRG99584 | Soybean | mitochondrion | 36.26 | 71.74 |
| Solyc01g086880.1.1 | Tomato | extracellular | 32.97 | 44.78 |
Protein Annotations
| MapMan:1.1.8.1.2.2 | Gene3D:3.30.70.3270 | InterPro:4Fe4S_Fe-S-bd | InterPro:4Fe4S_Fe_S_CS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016651 | GO:GO:0051539 | GO:GO:0055114 | InterPro:IPR017896 | InterPro:NADH_plast_OxRdtase_su_I | InterPro:NADH_quinone_OxRdtase_chainI |
| PFAM:PF13237 | ScanProsite:PS00198 | PFscan:PS51379 | PANTHER:PTHR10849 | PANTHER:PTHR10849:SF23 | SUPFAM:SSF54862 |
| TIGRFAMs:TIGR00403 | TIGRFAMs:TIGR01971 | EnsemblPlantsGene:TraesCSU01G221700 | EnsemblPlants:TraesCSU01G221700.1 | SEG:seg | : |
Description
No Description!
Coordinates
chrUn:-:327662567..327663115
Molecular Weight (calculated)
21453.7 Da
IEP (calculated)
7.307
GRAVY (calculated)
-0.350
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMFPMVTGF MSYGQQTIRA TRYIGQSFIT TLSHTNRLPI TIHYPYEKSI TPERFRGRIH FEFDKCIACE VCVRVCPIDL PVVDWRFEKD IKRKQLLNYS
101: IDFEICIFCG NCVEYWPTSC LSMTEEYELS TYDRHELNYN QIALSRLPIS IMGDYTIQTI RNSSESKINK EKSSNSRTIT DY
101: IDFEICIFCG NCVEYWPTSC LSMTEEYELS TYDRHELNYN QIALSRLPIS IMGDYTIQTI RNSSESKINK EKSSNSRTIT DY
001: MLPMITGFMN YGQQTLRAAR YIGQGFMITL SHTNRLPVTI QYPYEKLITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWKLETNIR KKRLLNYSID
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI
Arabidopsis Description
NDHINAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56755]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.