Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G030360.1 | Barley | cytosol | 51.67 | 83.04 |
| HORVU7Hr1G107870.1 | Barley | mitochondrion | 69.44 | 69.44 |
| HORVU5Hr1G064760.1 | Barley | mitochondrion | 69.44 | 69.44 |
| AGP50809 | Barley | plastid | 69.44 | 69.44 |
| HORVU1Hr1G048100.1 | Barley | mitochondrion | 69.44 | 69.44 |
| HORVU3Hr1G066350.1 | Barley | mitochondrion | 69.44 | 69.44 |
| Bra041055.1-P | Field mustard | mitochondrion | 65.0 | 68.02 |
| CAA33909 | Rice | mitochondrion | 65.56 | 66.29 |
| GRMZM5G866223_P01 | Maize | plastid | 65.56 | 65.56 |
| HORVU5Hr1G005450.1 | Barley | cytosol | 13.33 | 64.86 |
| CDX95228 | Canola | mitochondrion | 52.22 | 56.29 |
| CDY03035 | Canola | mitochondrion | 52.22 | 56.29 |
| CDY19662 | Canola | mitochondrion | 52.22 | 56.29 |
| CDY21197 | Canola | mitochondrion, plastid | 52.22 | 56.29 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 37.78 | 55.74 |
| ATCG01090.1 | Thale cress | mitochondrion | 52.22 | 54.65 |
| HORVU2Hr1G021310.1 | Barley | cytosol, mitochondrion | 19.44 | 44.87 |
| HORVU0Hr1G025040.1 | Barley | mitochondrion | 26.67 | 39.34 |
| KRG99584 | Soybean | mitochondrion | 17.78 | 34.78 |
| OQU91689 | Sorghum | extracellular | 12.78 | 28.05 |
| HORVU5Hr1G098910.3 | Barley | plastid | 16.67 | 10.14 |
Protein Annotations
| Gene3D:3.30.70.3270 | MapMan:35.1 | InterPro:4Fe4S_Fe-S-bd | InterPro:4Fe4S_Fe_S_CS | UniProt:A0A287V378 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 |
| EnsemblPlantsGene:HORVU6Hr1G087860 | EnsemblPlants:HORVU6Hr1G087860.1 | InterPro:IPR017896 | InterPro:NADH_plast_OxRdtase_su_I | PFAM:PF00037 | ScanProsite:PS00198 |
| PFscan:PS51379 | PANTHER:PTHR10849 | PANTHER:PTHR10849:SF23 | SUPFAM:SSF54862 | UniParc:UPI000B46440A | SEG:seg |
Description
No Description!
Coordinates
chrchr6H:+:565283355..565285991
Molecular Weight (calculated)
15992.0 Da
IEP (calculated)
6.236
GRAVY (calculated)
-0.273
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPMVTGFMS YGQQTIRATR YIGQSFITTL SHTSRLPITI HYPYEXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXDIK RKQLLNYSID
101: FGVCIFCGNC VEYCPTSCLS MTEEYELSTY DRHELNYNQI ALSRLPISIM GDYTIQTIRN SSESKINEEK SSNSRTITDY
101: FGVCIFCGNC VEYCPTSCLS MTEEYELSTY DRHELNYNQI ALSRLPISIM GDYTIQTIRN SSESKINEEK SSNSRTITDY
001: MLPMITGFMN YGQQTLRAAR YIGQGFMITL SHTNRLPVTI QYPYEKLITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWKLETNIR KKRLLNYSID
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI
Arabidopsis Description
NDHINAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56755]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.