CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99584	Soybean	mitochondrion	46.0	50.0
KRH10832	Soybean	mitochondrion	18.0	8.11
KRH21490	Soybean	mitochondrion	18.0	8.11
KRH60378	Soybean	extracellular	18.0	8.11

Protein Annotations

EMBL:ACUP02012262	EnsemblPlants:KRG89704	EnsemblPlantsGene:GLYMA_20G042300	GO:GO:0003674	GO:GO:0003824	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:NADH_plast_OxRdtase_su_I	PANTHER:PTHR10849	PANTHER:PTHR10849:SF23
ProteinID:KRG89704	ProteinID:KRG89704.1	UniParc:UPI0006EDF1E0	UniProt:A0A0R0EHV5	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr20:-:7620984..7621666

Molecular Weight (calculated)

11630.7 Da

IEP (calculated)

6.083

GRAVY (calculated)

-0.581

Length

100 amino acids

Sequence
(BLAST)

1: MFLMVSGFIN YSQQIVRAAR YIGQGYTITL SHANRLPVTI QYPYEKIIAL IEHTQENYSD PRNICEKKKE PNHNYKSENY DIHLIEAVPE SSYEDFTPGS

Best Arabidopsis Sequence Match ( ATCG01090.1 )
(BLAST)

001: MLPMITGFMN YGQQTLRAAR YIGQGFMITL SHTNRLPVTI QYPYEKLITS ERFRGRIHFE FDKCIACEVC VRVCPIDLPV VDWKLETNIR KKRLLNYSID
101: FGICIFCGNC VEYCPTNCLS MTEEYEFSTY DRHELNYNQI ALGRLPMSVI DDYTIRTIWN SPQTKNGVNP LI

Arabidopsis Description

NDHINAD(P)H-quinone oxidoreductase subunit I, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56755]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.