Factsheet for Solyc02g067750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 4
vacuole 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
plastid: 26371478

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017914	Potato	cytosol	52.94	94.41
GSMUA_Achr3P31010_001	Banana	cytosol	52.94	67.16
GSMUA_Achr7P26920_001	Banana	cytosol	49.41	62.69
GSMUA_Achr1P13950_001	Banana	cytosol	48.63	61.69
KXG32973	Sorghum	cytosol	48.63	60.78
Zm00001d044095_P001	Maize	extracellular	47.45	60.5
Solyc05g005490.2.1	Tomato	plastid	63.53	60.45
VIT_17s0000g08450.t01	Wine grape	cytosol	60.78	59.85
KXG32976	Sorghum	cytosol	47.06	59.41
TraesCS7B01G354800.1	Wheat	cytosol	46.27	58.42
Solyc02g086820.2.1	Tomato	plastid	73.33	58.26
KRH54402	Soybean	cytosol	59.61	58.24
TraesCS7D01G443500.1	Wheat	cytosol	45.1	58.08
TraesCS7D01G443400.1	Wheat	cytosol	45.88	57.92
VIT_17s0000g08460.t01	Wine grape	cytosol	58.82	57.47
GSMUA_Achr4P14900_001	Banana	plastid	54.9	52.63
VIT_11s0065g00100.t01	Wine grape	cytosol	39.61	52.33
Zm00001d044096_P001	Maize	cytosol	49.02	52.3
Zm00001d011454_P001	Maize	plastid	50.2	52.24
TraesCS7A01G454500.1	Wheat	cytosol	42.75	51.17
GSMUA_Achr9P07050_001	Banana	plastid	51.76	50.57
GSMUA_Achr6P27350_001	Banana	plasma membrane, plastid	52.94	49.82
TraesCS7B01G354900.1	Wheat	plastid	46.27	48.36
TraesCS3A01G230100.1	Wheat	cytosol, plastid	47.06	48.0
TraesCS7A01G454400.1	Wheat	plastid	44.71	47.7
TraesCS3D01G223300.1	Wheat	plastid	48.24	47.67
TraesCS7A01G454300.1	Wheat	extracellular, plastid	45.88	47.56
TraesCS3A01G230000.2	Wheat	plastid	48.24	47.49
TraesCS3B01G259300.1	Wheat	golgi, plastid	47.84	47.29
HORVU3Hr1G056990.2	Barley	cytosol, plastid	46.27	47.2
HORVU3Hr1G057090.2	Barley	plastid	48.24	46.95
TraesCS3D01G223200.1	Wheat	cytosol, plastid	45.88	46.8
TraesCS3B01G259400.1	Wheat	cytosol, plastid	45.88	46.8
KXG32978	Sorghum	cytosol, extracellular, plastid	46.27	46.09
Os01t0639900-01	Rice	extracellular, nucleus	48.63	45.59
Os01t0640000-00	Rice	plastid	38.43	41.35
Solyc09g010970.2.1	Tomato	mitochondrion, plastid	42.75	38.79
VIT_17s0000g08470.t01	Wine grape	plastid	24.31	36.69
HORVU7Hr1G103870.12	Barley	cytosol, plastid	47.06	32.7
KXG32970	Sorghum	cytosol	49.8	28.35
Zm00001d044099_P002	Maize	plastid	49.8	28.1

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	EMBL:AM949788	UniProt:B1VK36	InterPro:Carbonic_anhydrase
InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004089	GO:GO:0005488
GO:GO:0008150	GO:GO:0008270	GO:GO:0015976	GO:GO:0016829	InterPro:IPR036874	PFAM:PF00484
ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002	PANTHER:PTHR11002:SF27	SMART:SM00947	SUPFAM:SSF53056
EnsemblPlantsGene:Solyc02g067750.2	EnsemblPlants:Solyc02g067750.2.1	UniParc:UPI0001718189	:	:	:

Description

Carbonic anhydrase [Source:UniProtKB/TrEMBL;Acc:B1VK36]

Coordinates

chr2:-:37862140..37864509

Molecular Weight (calculated)

28585.4 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.184

Length

255 amino acids

Sequence
(BLAST)

001: MANKSYEEAI VSLQNLISEK GELGPFVAER IDEMTAELQT SSKPFDPVHR IKCGFNYFKT EIYDKNPELF DKLKKGQEPK FFVFACSDSR VSPSHILNFQ
101: PGEAFMVRNI ANMVPPYDKL RYSGTGAAIE YAVLHLKVEN ILVIGHSSCG GIKALMSLPE DGSESTEFIE NWVKIGLPAK AKVLAEHPNI SFEEQCKYCE
201: KEAVNVSLAN LLTYPFVRDG LVNKTLSLKG GYYDFIKGEF KLWGLHFGLS HPCSI

Best Arabidopsis Sequence Match ( AT3G01500.1 )
(BLAST)

001: MGTEAYDEAI EALKKLLIEK EELKTVAAAK VEQITAALQT GTSSDKKAFD PVETIKQGFI KFKKEKYETN PALYGELAKG QSPKYMVFAC SDSRVCPSHV
101: LDFQPGDAFV VRNIANMVPP FDKVKYGGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC LPAKSKVISE LGDSAFEDQC
201: GRCEREAVNV SLANLLTYPF VREGLVKGTL ALKGGYYDFV KGAFELWGLE FGLSETSSVK DVATILHWKL

Arabidopsis Description

BCA1Beta carbonic anhydrase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P27140]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.