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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, plastid
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:extracellular
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
EER92927
EER94525
EER94961
EER99083
EER99085
EER99354
EER99617
EER99796
EES00597
EES01418
EES03003
EES03536
EES03615
EES05275
EES06013
EES06863
EES07043
EES12301
EES13880
EES14275
EES15199
EES17794
EES18401
EES18559
KXG19687
KXG21447
KXG22309
KXG22420
KXG30817
KXG36814
KXG37457
KXG38809
OQU75662
OQU77683
OQU77742
OQU78269
OQU86913
OQU89126
OQU89974
OQU91338
OQU91808
OQU92761

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G14740.1 EER99796 AT1G19580.1 18189341
AT5G14740.1 EES00597 AT1G19580.1 18189341
AT5G14740.1 KXG21447 AT1G68680.1 18189341
AT5G14740.1 KXG22420 AT1G76200.1 18189341
AT5G14740.1 KXG37457 AT1G79010.1 18189341
AT5G14740.1 EER92927 AT2G02050.1 18189341
AT5G14740.1 EES05275 AT2G02510.1 18189341
AT5G14740.1 EES06013 AT2G20360.1 18189341
AT5G14740.1 EES01418 AT2G31490.1 18189341
AT5G14740.1 EES03615 AT2G31490.1 18189341
AT5G14740.1 OQU91338 AT2G31490.1 18189341
AT5G14740.1 EER99083 AT2G42310.1 18189341
AT5G14740.1 EES14275 AT2G42310.1 18189341
AT5G14740.1 EES15199 AT2G47690.1 18189341
AT5G14740.1 KXG38809 AT3G03100.1 18189341
AT5G14740.1 OQU92761 AT3G06310.1 18189341
AT5G14740.1 EES18401 AT3G08610.1 18189341
AT5G14740.1 EES03003 AT3G12260.1 18189341
AT5G14740.1 EES06863 AT3G48680.1 18189341
AT5G14740.1 EER99085 AT3G57790.1 18189341
AT5G14740.1 EER99354 AT4G00585.1 18189341
AT5G14740.1 KXG22309 AT4G02580.1 18189341
AT5G14740.1 EES13880 AT4G16450.1 18189341
AT5G14740.1 OQU89974 AT4G20150.1 18189341
AT5G14740.1 KXG36814 AT5G08530.1 18189341
AT5G14740.1 EES03536 AT5G11770.1 18189341
AT5G14740.1 EES18559 AT5G11770.1 18189341
AT5G14740.1 EES07043 AT5G40770.1 18189341
AT5G14740.1 EES12301 AT5G40770.1 18189341
AT5G14740.1 OQU78269 AT5G42980.1 15352244
AT5G14740.1 EER94525 AT5G47570.1 18189341
AT5G14740.1 OQU77683 AT5G47570.1 18189341
AT5G14740.1 EES17794 AT5G47890.1 18189341
AT5G14740.1 EER94961 AT5G52840.1 18189341
AT5G14740.1 EER99617 AT5G67590.1 18189341
AT5G14740.1 KXG19687 ATMG00270.1 18189341
AT5G14740.1 OQU75662 ATMG00270.1 18189341
AT5G14740.1 OQU77742 ATMG00270.1 18189341
AT5G14740.1 OQU89126 ATMG00285.1 18189341
AT5G14740.1 OQU91808 ATMG00510.1 18189341
AT5G14740.1 KXG30817 ATMG00513.1 18189341
AT5G14740.1 OQU86913 ATMG00580.1 18189341
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G230100.1 Wheat cytosol, plastid 62.11 63.6
KXG32976 Sorghum cytosol 50.0 63.37
KXG32973 Sorghum cytosol 50.39 63.24
HORVU3Hr1G056990.2 Barley cytosol, plastid 61.72 63.2
TraesCS3D01G223200.1 Wheat cytosol, plastid 61.33 62.8
TraesCS3B01G259400.1 Wheat cytosol, plastid 60.55 62.0
GSMUA_Achr3P31010_001 Banana cytosol 48.05 61.19
GSMUA_Achr7P26920_001 Banana cytosol 46.09 58.71
GSMUA_Achr1P13950_001 Banana cytosol 44.53 56.72
Os01t0640000-00 Rice plastid 48.44 52.32
PGSC0003DMT400017914 Potato cytosol 27.73 49.65
CDY64836 Canola plastid 37.5 47.76
VIT_01s0127g00720.t01 Wine grape cytosol 47.27 47.27
Solyc02g067750.2.1 Tomato plastid 46.09 46.27
Bra023485.1-P Field mustard cytosol 46.48 45.95
CDX85584 Canola cytosol 46.48 45.95
CDX91024 Canola cytosol 46.48 45.95
GSMUA_Achr4P14900_001 Banana plastid 47.66 45.86
GSMUA_Achr9P07050_001 Banana plastid 46.48 45.59
KRH45667 Soybean nucleus 46.09 45.56
KRG99341 Soybean nucleus 42.58 45.23
CDY69444 Canola cytosol 45.31 44.96
Bra016223.1-P Field mustard cytosol 44.92 44.57
Bra007912.1-P Field mustard cytosol 44.92 44.57
GSMUA_Achr6P27350_001 Banana plasma membrane, plastid 46.88 44.28
PGSC0003DMT400079571 Potato cytosol 43.75 43.75
VIT_17s0000g08450.t01 Wine grape cytosol 42.97 42.47
KRH74596 Soybean nucleus 46.09 42.45
Solyc05g005490.2.1 Tomato plastid 44.14 42.16
KRH69565 Soybean nucleus 45.7 42.09
VIT_17s0000g08460.t01 Wine grape cytosol 42.58 41.76
CDY25799 Canola cytosol 42.19 41.7
Bra018698.1-P Field mustard cytosol 42.19 41.7
Bra012384.1-P Field mustard cytosol 41.8 41.47
AT1G23730.2 Thale cress cytosol 41.8 41.47
CDX93638 Canola cytosol 36.33 41.15
Bra018699.1-P Field mustard cytosol 36.33 41.15
CDY57847 Canola plastid 44.92 41.07
CDY57304 Canola cytosol 44.92 41.07
CDY03752 Canola cytosol 44.92 41.07
CDY61543 Canola cytosol 41.41 40.93
CDY28477 Canola cytosol 41.41 40.93
Bra024615.1-P Field mustard cytosol 41.02 40.54
AT1G70410.2 Thale cress cytosol 44.14 40.36
CDX93637 Canola cytosol 35.16 40.18
CDY64834 Canola cytosol 40.62 40.15
KRH54402 Soybean cytosol 40.62 39.85
CDY47630 Canola cytosol 36.33 39.57
PGSC0003DMT400001297 Potato cytosol, extracellular, plastid 46.48 37.07
Solyc02g086820.2.1 Tomato plastid 46.48 37.07
AT5G14740.1 Thale cress plastid 46.09 35.65
VIT_14s0066g01210.t01 Wine grape plastid 46.48 35.52
Bra039113.1-P Field mustard plastid 46.09 35.33
KRG93289 Soybean nucleus, plastid 46.88 35.19
KRH56601 Soybean plastid 46.48 35.1
Bra040520.1-P Field mustard plastid 44.92 34.53
VIT_11s0065g00100.t01 Wine grape cytosol 25.78 34.2
AT3G01500.2 Thale cress plastid 45.7 33.72
CDY28672 Canola plastid 44.92 33.43
CDY37516 Canola plastid 42.58 31.59
KXG32970 Sorghum cytosol 53.12 30.36
VIT_17s0000g08470.t01 Wine grape plastid 18.75 28.4
CDY49059 Canola plastid 41.8 28.08
OQU89631 Sorghum plastid 35.55 18.57
Protein Annotations
KEGG:00910+4.2.1.1Gene3D:3.40.1050.10MapMan:35.1UniProt:A0A1B6Q4X5InterPro:Carbonic_anhydraseInterPro:Carbonic_anhydrase_CS
InterPro:Carbonic_anhydrase_sfGO:GO:0003674GO:GO:0003824GO:GO:0004089GO:GO:0005488GO:GO:0008150
GO:GO:0008270GO:GO:0015976GO:GO:0016829InterPro:IPR036874EnsemblPlants:KXG32978ProteinID:KXG32978
ProteinID:KXG32978.1PFAM:PF00484ScanProsite:PS00704ScanProsite:PS00705PANTHER:PTHR11002PANTHER:PTHR11002:SF24
MetaCyc:PWY-241MetaCyc:PWY-6142MetaCyc:PWY-7115MetaCyc:PWY-7117SMART:SM00947EnsemblPlantsGene:SORBI_3003G234600
SUPFAM:SSF53056UniParc:UPI00081ABCE3SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:+:57323907..57327962
Molecular Weight (calculated)
28449.7 Da
IEP (calculated)
8.780
GRAVY (calculated)
-0.134
Length
256 amino acids
Sequence
(BLAST)
001: MGGCCCGCGC GCGCFLDRKP PRENPMAVHR EQPIRRGSSA ADYPSPAHMV TYSEGLGAAE RLNAGFRTFK KNVYDQNPKL FGKLKSAQSP KYMVFACSDS
101: RVCPSVTLDL KPGEAFTVRN IASLVPTYKQ NVHCNIGSAI EYAVTILKVE CIVVIGHSCC GGIRALLSLK EDRPHTYHFI ENWVKIGLDI KKKVERIHAF
201: LPFDEQCTKL EIEAVNLSLR NLKTYPFVMD RLAKGTLKLI GARYDFVCGT FQTWNA
Best Arabidopsis Sequence Match ( AT1G70410.3 )
(BLAST)
001: MATESYEAAI KGLNDLLSTK ADLGNVAAAK IKALTAELKE LDSSNSDAIE RIKTGFTQFK TEKYLKNSTL FNHLAKTQTP KFLVFACSDS RVCPSHILNF
101: QPGEAFVVRN IANMVPPFDQ KRHSGVGAAV EYAVVHLKVE NILVIGHSCC GGIKGLMSIE DDAAPTQSDF IENWVKIGAS ARNKIKEEHK DLSYDDQCNK
201: CEKEAVNVSL GNLLSYPFVR AEVVKNTLAI RGGHYNFVKG TFDLWELDFK TTPAFAFS
Arabidopsis Description
BCA4Beta carbonic anhydrase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CE4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.