CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
endoplasmic reticulum 2
extracellular 1
golgi 1
plasma membrane 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G285400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	61.15	90.43
HORVU3Hr1G044970.1	Barley	endoplasmic reticulum, extracellular, vacuole	28.78	83.33
HORVU3Hr1G040850.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	37.41	58.43
TraesCS3D01G386900.1	Wheat	mitochondrion	82.73	56.93
HORVU7Hr1G044360.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	35.97	56.18
TraesCS2B01G283400.1	Wheat	mitochondrion	81.3	55.94
HORVU5Hr1G042680.1	Barley	mitochondrion, plasma membrane	79.14	55.28
HORVU1Hr1G009350.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	34.53	53.93
Solyc10g045730.1.1	Tomato	mitochondrion	46.76	52.42
HORVU0Hr1G037060.1	Barley	endoplasmic reticulum	71.94	48.54
BAC19862	Rice	plasma membrane	71.22	48.29
TraesCS7A01G526200.1	Wheat	mitochondrion, plasma membrane	84.17	47.37
TraesCS1B01G458600.1	Wheat	mitochondrion, plasma membrane	84.17	47.37
ATMG00270.1	Thale cress	plasma membrane	69.78	47.32
TraesCS6B01G464600.1	Wheat	mitochondrion, plasma membrane	83.45	46.96
GRMZM5G897755_P01	Maize	plasma membrane	74.1	46.82
TraesCS2B01G284000.1	Wheat	mitochondrion, plasma membrane	82.73	46.56
TraesCS4B01G238300.1	Wheat	mitochondrion, plasma membrane	85.61	46.3
TraesCS5B01G388600.1	Wheat	mitochondrion, plasma membrane	82.01	46.15
TraesCS7A01G238000.1	Wheat	mitochondrion	82.73	46.0
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	68.35	45.89
TraesCS7D01G286400.1	Wheat	mitochondrion, plasma membrane	81.3	45.56
KRH45920	Soybean	plasma membrane, vacuole	69.78	44.29
TraesCS1A01G097900.1	Wheat	plasma membrane	61.87	40.0
OQU75662	Sorghum	mitochondrion, plasma membrane	61.87	38.39
BAV58153	Barley	mitochondrion, plasma membrane	83.45	37.18
TraesCS7B01G051500.1	Wheat	mitochondrion, plasma membrane	82.01	36.31
TraesCS2D01G247500.1	Wheat	mitochondrion, plasma membrane	76.98	36.03
OQU77742	Sorghum	mitochondrion	61.87	28.29
HORVU6Hr1G037090.1	Barley	cytosol, plastid, vacuole	22.3	22.79

Protein Annotations

Gene3D:1.20.120.1200	MapMan:2.4.1.3.7	UniProt:A0A194YI93	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008137	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlants:KXG19687
ProteinID:KXG19687	ProteinID:KXG19687.1	InterPro:NADH_UbQ/plastoQ_OxRdtase_su6	ProteinID:OQU76135.1	PFAM:PF00499	PANTHER:PTHR33269
PANTHER:PTHR33269:SF4	EnsemblPlantsGene:SORBI_3010G098800	TMHMM:TMhelix	UniParc:UPI0007F1DE25	:	:

Description

hypothetical protein

Coordinates

chr10:+:8912806..8917626

Molecular Weight (calculated)

15640.8 Da

IEP (calculated)

5.507

GRAVY (calculated)

1.112

Length

139 amino acids

Sequence
(BLAST)

001: MCLLAPAFKF HFKEGRRTMI LSVLSSPALV SGLMVVRAKN PVHSVLFPIL VFCDTSGLLI LLDLDFSAMI FPVVHIGAIV ISFLFVVMMF NIQIAEIHEE
101: VLRYLLVSGI IGLIFWWEMF FIFFDSGEPF EVPASPAPF

Best Arabidopsis Sequence Match ( ATMG00270.1 )
(BLAST)

001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY

Arabidopsis Description

NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.