Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G040850.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 41.46 | 95.51 |
| HORVU7Hr1G044360.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 39.51 | 91.01 |
| HORVU1Hr1G009350.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 39.02 | 89.89 |
| HORVU0Hr1G037060.1 | Barley | endoplasmic reticulum | 89.27 | 88.83 |
| ATMG00270.1 | Thale cress | plasma membrane | 88.78 | 88.78 |
| HORVU3Hr1G044970.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 20.49 | 87.5 |
| TraesCS2B01G283400.1 | Wheat | mitochondrion | 83.9 | 85.15 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 85.37 | 84.54 |
| TraesCS3D01G386900.1 | Wheat | mitochondrion | 82.44 | 83.66 |
| GRMZM5G897755_P01 | Maize | plasma membrane | 89.27 | 83.18 |
| HORVU6Hr1G037090.1 | Barley | cytosol, plastid, vacuole | 54.15 | 81.62 |
| HORVU5Hr1G042680.1 | Barley | mitochondrion, plasma membrane | 79.02 | 81.41 |
| KRH45920 | Soybean | plasma membrane, vacuole | 86.83 | 81.28 |
| TraesCS1A01G097900.1 | Wheat | plasma membrane | 82.93 | 79.07 |
| TraesCS1B01G458600.1 | Wheat | mitochondrion, plasma membrane | 91.22 | 75.71 |
| TraesCS6B01G464600.1 | Wheat | mitochondrion, plasma membrane | 89.76 | 74.49 |
| TraesCS7A01G526200.1 | Wheat | mitochondrion, plasma membrane | 89.76 | 74.49 |
| TraesCS5B01G388600.1 | Wheat | mitochondrion, plasma membrane | 89.27 | 74.09 |
| TraesCS2B01G284000.1 | Wheat | mitochondrion, plasma membrane | 88.29 | 73.28 |
| TraesCS7D01G286400.1 | Wheat | mitochondrion, plasma membrane | 88.29 | 72.98 |
| TraesCS7A01G238000.1 | Wheat | mitochondrion | 88.29 | 72.4 |
| TraesCS4B01G238300.1 | Wheat | mitochondrion, plasma membrane | 90.73 | 72.37 |
| KXG19687 | Sorghum | mitochondrion | 48.29 | 71.22 |
| BAV58153 | Barley | mitochondrion, plasma membrane | 89.76 | 58.97 |
| TraesCS2D01G247500.1 | Wheat | mitochondrion, plasma membrane | 84.39 | 58.25 |
| TraesCS7B01G051500.1 | Wheat | mitochondrion, plasma membrane | 88.78 | 57.96 |
| Solyc10g045730.1.1 | Tomato | mitochondrion | 34.15 | 56.45 |
| OQU75662 | Sorghum | mitochondrion, plasma membrane | 36.59 | 33.48 |
| OQU77742 | Sorghum | mitochondrion | 36.59 | 24.67 |
Protein Annotations
| Gene3D:1.20.120.1200 | MapMan:2.4.1.3.7 | EntrezGene:6450132 | EnsemblPlants:BAC19862 | EnsemblPlantsGene:BAC19862 | ProteinID:BAC19862 |
| ProteinID:BAC19862.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005886 | GO:GO:0008137 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016651 | GO:GO:0051539 |
| GO:GO:0055114 | InterPro:NADH_UbQ/plastoQ_OxRdtase_su6 | PFAM:PF00499 | PANTHER:PTHR33269 | PANTHER:PTHR33269:SF4 | UniProt:Q8HCQ7 |
| Reactome:R-HSA-611105 | Reactome:R-HSA-6799198 | TMHMM:TMhelix | UniParc:UPI000009ACB4 | UniParc:UPI00004E569E | RefSeq:YP_002000558.1 |
Description
nad6NADH dehydrogenase subunit 6
Coordinates
chrMt:-:59519..60136
Molecular Weight (calculated)
23326.2 Da
IEP (calculated)
9.676
GRAVY (calculated)
0.677
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MILSVLSSPA LVSGLMVVRA KNPVHSVLFP ILIFCDTAGL LILLGLDFSA MISPVIHIGA IAVSFLFVVM MFNIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNETI PLLPTHRNTT SLRYTVYAGK VRNWTNLDTL GNLLYTYYSV WFLVSTLISL VAMIGAIVLT MHRTTKVQRQ DVFRRNALDS RRTIMRRTTD
201: QISIY
101: MFFILDNETI PLLPTHRNTT SLRYTVYAGK VRNWTNLDTL GNLLYTYYSV WFLVSTLISL VAMIGAIVLT MHRTTKVQRQ DVFRRNALDS RRTIMRRTTD
201: QISIY
001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
Arabidopsis Description
NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.