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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G040850.1 Barley endoplasmic reticulum, extracellular, plasma membrane 95.51 95.51
HORVU1Hr1G009350.1 Barley endoplasmic reticulum, extracellular, plasma membrane 94.38 94.38
HORVU3Hr1G044970.1 Barley endoplasmic reticulum, extracellular, vacuole 42.7 79.17
HORVU6Hr1G037090.1 Barley cytosol, plastid, vacuole 70.79 46.32
HORVU5Hr1G042680.1 Barley mitochondrion, plasma membrane 93.26 41.71
HORVU0Hr1G037060.1 Barley endoplasmic reticulum 95.51 41.26
TraesCS2B01G283400.1 Wheat mitochondrion 93.26 41.09
BAC19862 Rice plasma membrane 91.01 39.51
ATMG00270.1 Thale cress plasma membrane 89.89 39.02
TraesCS1A01G097900.1 Wheat plasma membrane 93.26 38.6
GRMZM5G897755_P01 Maize plasma membrane 92.13 37.27
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 85.39 36.72
KRH45920 Soybean plasma membrane, vacuole 89.89 36.53
KXG19687 Sorghum mitochondrion 56.18 35.97
TraesCS7A01G526200.1 Wheat mitochondrion, plasma membrane 94.38 34.01
TraesCS6B01G464600.1 Wheat mitochondrion, plasma membrane 94.38 34.01
TraesCS1B01G458600.1 Wheat mitochondrion, plasma membrane 94.38 34.01
TraesCS7D01G286400.1 Wheat mitochondrion, plasma membrane 94.38 33.87
TraesCS7A01G238000.1 Wheat mitochondrion 93.26 33.2
TraesCS2B01G284000.1 Wheat mitochondrion, plasma membrane 92.13 33.2
Solyc10g045730.1.1 Tomato mitochondrion 42.7 30.65
TraesCS2D01G247500.1 Wheat mitochondrion, plasma membrane 93.26 27.95
BAV58153 Barley mitochondrion, plasma membrane 96.63 27.56
TraesCS7B01G051500.1 Wheat mitochondrion, plasma membrane 92.13 26.11
OQU75662 Sorghum mitochondrion, plasma membrane 28.09 11.16
OQU77742 Sorghum mitochondrion 28.09 8.22
Protein Annotations
EnsemblPlants:HORVU7Hr1G044360.1EnsemblPlantsGene:HORVU7Hr1G044360Gene3D:1.20.120.1200GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR33269PANTHER:PTHR33269:SF4TMHMM:TMhelixUniParc:UPI000B475C85UniProt:A0A287WAB8MapMan:2.4.1.3.7
Description
No Description!
Coordinates
chrchr7H:-:137772794..137773407
Molecular Weight (calculated)
10310.8 Da
IEP (calculated)
6.229
GRAVY (calculated)
0.628
Length
89 amino acids
Sequence
(BLAST)
1: MISPVVHIGA IVVSFLFVVT MFNIQIAEIH EEVLRYLPVS GIIGLIFWWE MFFILDNETI PLLPTHRNTT SLRYTVYAGK VRSWTNLET
Best Arabidopsis Sequence Match ( ATMG00270.1 )
(BLAST)
001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
Arabidopsis Description
NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.