CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G285400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	29.46	70.21
OQU77742	Sorghum	mitochondrion	88.84	65.46
KXG19687	Sorghum	mitochondrion	38.39	61.87
TraesCS3D01G386900.1	Wheat	mitochondrion	41.96	46.53
TraesCS2B01G283400.1	Wheat	mitochondrion	41.07	45.54
HORVU5Hr1G042680.1	Barley	mitochondrion, plasma membrane	40.18	45.23
Solyc10g045730.1.1	Tomato	mitochondrion	24.11	43.55
HORVU3Hr1G044970.1	Barley	endoplasmic reticulum, extracellular, vacuole	8.48	39.58
TraesCS1B01G458600.1	Wheat	mitochondrion, plasma membrane	42.41	38.46
HORVU0Hr1G037060.1	Barley	endoplasmic reticulum	35.27	38.35
TraesCS5B01G388600.1	Wheat	mitochondrion, plasma membrane	41.96	38.06
TraesCS7A01G526200.1	Wheat	mitochondrion, plasma membrane	41.52	37.65
TraesCS4B01G238300.1	Wheat	mitochondrion, plasma membrane	42.86	37.35
TraesCS6B01G464600.1	Wheat	mitochondrion, plasma membrane	41.07	37.25
TraesCS2B01G284000.1	Wheat	mitochondrion, plasma membrane	41.07	37.25
TraesCS7D01G286400.1	Wheat	mitochondrion, plasma membrane	41.07	37.1
BAC19862	Rice	plasma membrane	33.48	36.59
ATMG00270.1	Thale cress	plasma membrane	33.48	36.59
GRMZM5G897755_P01	Maize	plasma membrane	35.71	36.36
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	33.04	35.75
TraesCS7A01G238000.1	Wheat	mitochondrion	39.73	35.6
KRH45920	Soybean	plasma membrane, vacuole	34.38	35.16
BAV58153	Barley	mitochondrion, plasma membrane	42.86	30.77
HORVU3Hr1G040850.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	12.05	30.34
TraesCS1A01G097900.1	Wheat	plasma membrane	28.57	29.77
TraesCS7B01G051500.1	Wheat	mitochondrion, plasma membrane	41.52	29.62
TraesCS2D01G247500.1	Wheat	mitochondrion, plasma membrane	37.95	28.62
HORVU7Hr1G044360.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	11.16	28.09
HORVU1Hr1G009350.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	11.16	28.09
HORVU6Hr1G037090.1	Barley	cytosol, plastid, vacuole	7.14	11.76

Protein Annotations

Gene3D:1.20.120.1200	MapMan:35.1	UniProt:A0A120GUW1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0055114	ProteinID:KXG18855.1	InterPro:NADH_UbQ/plastoQ_OxRdtase_su6	EnsemblPlants:OQU75662	ProteinID:OQU75662	ProteinID:OQU75662.1
PFAM:PF00499	PANTHER:PTHR33269	PANTHER:PTHR33269:SF4	EnsemblPlantsGene:SORBI_3K031300	TMHMM:TMhelix	UniParc:UPI00076BBFFA
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chrsuper_41:+:159357..160313

Molecular Weight (calculated)

24812.6 Da

IEP (calculated)

6.675

GRAVY (calculated)

0.566

Length

224 amino acids

Sequence
(BLAST)

001: MRLLAPAFKF HFKEGRRTMI LSVLSSPALV SGLMVVRAEN PVHSVLFPIL VFCDTSGLLI LLGLDFSAMI FPVVHIGAIA VSFLSLDSNS RRSISPFGHR
101: SCYIFLYLYL PKQISRILFG LSFYFLTVKL FLLLLNSYPL FAPEALVFAS SYSGASAPAY DIMLFGHDDD DLSRAVAPFL PWGGGAPVTL PEERPLTMEE
201: EDRLALVLDY QNKIGTLLKS LDIS

Best Arabidopsis Sequence Match ( ATMG00270.1 )
(BLAST)

001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY

Arabidopsis Description

NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.