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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:extracellular, mitochondrion, plasma membrane, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G458600.1 Wheat mitochondrion, plasma membrane 76.75 97.57
HORVU3Hr1G040850.1 Barley endoplasmic reticulum, extracellular, plasma membrane 27.39 96.63
TraesCS7A01G526200.1 Wheat mitochondrion, plasma membrane 75.8 96.36
TraesCS6B01G464600.1 Wheat mitochondrion, plasma membrane 75.8 96.36
TraesCS5B01G388600.1 Wheat mitochondrion, plasma membrane 74.84 95.14
TraesCS2B01G284000.1 Wheat mitochondrion, plasma membrane 74.2 94.33
TraesCS2B01G283400.1 Wheat mitochondrion 60.51 94.06
HORVU7Hr1G044360.1 Barley endoplasmic reticulum, extracellular, plasma membrane 26.11 92.13
HORVU1Hr1G009350.1 Barley endoplasmic reticulum, extracellular, plasma membrane 25.8 91.01
TraesCS4B01G238300.1 Wheat mitochondrion, plasma membrane 73.25 89.49
BAC19862 Rice plasma membrane 57.96 88.78
TraesCS1A01G097900.1 Wheat plasma membrane 60.51 88.37
TraesCS7D01G286400.1 Wheat mitochondrion, plasma membrane 69.43 87.9
HORVU3Hr1G044970.1 Barley endoplasmic reticulum, extracellular, vacuole 13.38 87.5
ATMG00270.1 Thale cress plasma membrane 57.01 87.32
GRMZM5G897755_P01 Maize plasma membrane 59.24 84.55
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 55.41 84.06
KXG19687 Sorghum mitochondrion 36.31 82.01
HORVU6Hr1G037090.1 Barley cytosol, plastid, vacuole 35.35 81.62
KRH45920 Soybean plasma membrane, vacuole 56.37 80.82
Solyc10g045730.1.1 Tomato mitochondrion 26.43 66.94
OQU75662 Sorghum mitochondrion, plasma membrane 29.62 41.52
OQU77742 Sorghum mitochondrion 30.25 31.25
TraesCS3B01G301300.1 Wheat extracellular 5.41 9.44
Protein Annotations
EnsemblPlants:TraesCS7B01G051500.1EnsemblPlantsGene:TraesCS7B01G051500Gene3D:1.20.120.1200GO:GO:0003674GO:GO:0003824GO:GO:0008137
GO:GO:0008150GO:GO:0008152GO:GO:0055114InterPro:NADH_UbQ/plastoQ_OxRdtase_su6PANTHER:PTHR33269PANTHER:PTHR33269:SF4
PFAM:PF00499TMHMM:TMhelixMapMan:2.4.1.3.7:::
Description
No Description!
Coordinates
chr7B:-:54048215..54049159
Molecular Weight (calculated)
35880.7 Da
IEP (calculated)
10.349
GRAVY (calculated)
0.299
Length
314 amino acids
Sequence
(BLAST)
001: MRLLAPAFKF HFKGGRRTMI LSVLSSPTLV SGLMVVRAKN PLHSVLFPIL VFCNTSGLLI LLGLDFSAMI SPVVHIGAIA VSFLFVVMMF NIQIAEIHKE
101: VLRYLPVSGI IGLIFWWEMF FILDNETIPL LPTHRNTTSL RYMVYAGKVR SWTNLETLGN LLYTYYSVWF LVSSLILLVA MIGAIVLTMH RTTKVKRQDV
201: FRRNALDSRS HIMNRTISPF GHSHRRSFSS GAGGPPDNYK ETFKMWIYCS EYKDFPGLKC KIDILLAFLE PGEILFMVNT FPRDFPLLEI LEPQDIRNII
301: SHSHKQWKPP KKGG
Best Arabidopsis Sequence Match ( ATMG00270.1 )
(BLAST)
001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
Arabidopsis Description
NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.