Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- vacuole 4
- extracellular 3
- endoplasmic reticulum 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| ATMG00270.1 | Thale cress | plasma membrane | 88.58 | 94.63 |
| HORVU3Hr1G040850.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 38.36 | 94.38 |
| HORVU7Hr1G044360.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 36.53 | 89.89 |
| TraesCS7D01G285400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 38.36 | 89.36 |
| HORVU1Hr1G009350.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 36.07 | 88.76 |
| HORVU0Hr1G037060.1 | Barley | endoplasmic reticulum | 82.19 | 87.38 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 82.19 | 86.96 |
| BAC19862 | Rice | plasma membrane | 81.28 | 86.83 |
| TraesCS2B01G283400.1 | Wheat | mitochondrion | 77.17 | 83.66 |
| HORVU3Hr1G044970.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 18.26 | 83.33 |
| GRMZM5G897755_P01 | Maize | plasma membrane | 83.56 | 83.18 |
| TraesCS3D01G386900.1 | Wheat | mitochondrion | 75.8 | 82.18 |
| HORVU5Hr1G042680.1 | Barley | mitochondrion, plasma membrane | 72.6 | 79.9 |
| HORVU6Hr1G037090.1 | Barley | cytosol, plastid, vacuole | 49.32 | 79.41 |
| TraesCS1A01G097900.1 | Wheat | plasma membrane | 75.8 | 77.21 |
| TraesCS1B01G458600.1 | Wheat | mitochondrion, plasma membrane | 83.11 | 73.68 |
| TraesCS6B01G464600.1 | Wheat | mitochondrion, plasma membrane | 81.74 | 72.47 |
| TraesCS7A01G526200.1 | Wheat | mitochondrion, plasma membrane | 81.74 | 72.47 |
| TraesCS2B01G284000.1 | Wheat | mitochondrion, plasma membrane | 81.28 | 72.06 |
| TraesCS5B01G388600.1 | Wheat | mitochondrion, plasma membrane | 80.82 | 71.66 |
| TraesCS7D01G286400.1 | Wheat | mitochondrion, plasma membrane | 80.82 | 71.37 |
| TraesCS7A01G238000.1 | Wheat | mitochondrion | 81.28 | 71.2 |
| TraesCS4B01G238300.1 | Wheat | mitochondrion, plasma membrane | 82.65 | 70.43 |
| KXG19687 | Sorghum | mitochondrion | 44.29 | 69.78 |
| Solyc10g045730.1.1 | Tomato | mitochondrion | 34.7 | 61.29 |
| BAV58153 | Barley | mitochondrion, plasma membrane | 82.65 | 58.01 |
| TraesCS2D01G247500.1 | Wheat | mitochondrion, plasma membrane | 76.71 | 56.57 |
| TraesCS7B01G051500.1 | Wheat | mitochondrion, plasma membrane | 80.82 | 56.37 |
| Zm00001d035824_P001 | Maize | cytosol, plasma membrane, vacuole | 26.94 | 47.2 |
| OQU75662 | Sorghum | mitochondrion, plasma membrane | 35.16 | 34.38 |
| OQU77742 | Sorghum | mitochondrion | 35.16 | 25.33 |
Protein Annotations
| Gene3D:1.20.120.1200 | EntrezGene:15308540 | MapMan:2.4.1.3.7 | EMBL:ACUP02005295 | ProteinID:AFR34314.1 | EnsemblPlantsGene:GLYMA_08G301000 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0055114 | UniProt:K7L9U2 | EnsemblPlants:KRH45920 | ProteinID:KRH45920 | ProteinID:KRH45920.1 |
| InterPro:NADH_UbQ/plastoQ_OxRdtase_su6 | PFAM:PF00499 | PANTHER:PTHR33269 | PANTHER:PTHR33269:SF4 | TMHMM:TMhelix | UniParc:UPI0002338833 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:41903190..41903849
Molecular Weight (calculated)
25222.5 Da
IEP (calculated)
10.775
GRAVY (calculated)
0.503
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFSA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLILWWE
101: MFFILDNETI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYFV WFLVPSLILL VAMIGAIVLT MHRTTEVKRQ DVFRLNAIDF RRTIMRRTTD
201: HSRSTKRKVA RRYWFKSNS
101: MFFILDNETI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYFV WFLVPSLILL VAMIGAIVLT MHRTTEVKRQ DVFRLNAIDF RRTIMRRTTD
201: HSRSTKRKVA RRYWFKSNS
001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
Arabidopsis Description
NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.