Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g045730.1.1 | Tomato | mitochondrion | 29.6 | 29.84 |
| ATMG00270.1 | Thale cress | plasma membrane | 47.2 | 28.78 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 46.4 | 28.02 |
| KRH45920 | Soybean | plasma membrane, vacuole | 47.2 | 26.94 |
| GRMZM5G897755_P01 | Maize | plasma membrane | 47.2 | 26.82 |
Protein Annotations
| EnsemblPlants:Zm00001d035824_P001 | EnsemblPlants:Zm00001d035824_T001 | EnsemblPlantsGene:Zm00001d035824 | Gene3D:1.20.120.1200 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR33269 | PANTHER:PTHR33269:SF4 | ProteinID:AQK79738.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000843E579 | UniProt:A0A1D6LIY0 | MapMan:35.1 | : | : | : |
Description
ATP synthase subunit a
Coordinates
chr6:-:53501050..53502867
Molecular Weight (calculated)
14225.4 Da
IEP (calculated)
9.597
GRAVY (calculated)
-0.043
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSNDSFRF VEPCFGLWFD GCLDFSAMIF PVVHIGAIAV SFLFVVMMFN IQIAEIHEEV LRYLPKEGEA HLPSLGTLLG KVSPPSFFSR YFTWKGRCGK
101: EERSGGVKKV KRSKPKERKS NLIQY
101: EERSGGVKKV KRSKPKERKS NLIQY
001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
Arabidopsis Description
NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.