CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
vacuole 2
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU75662	Sorghum	mitochondrion, plasma membrane	65.46	88.84
TraesCS7D01G285400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	21.38	69.15
KXG19687	Sorghum	mitochondrion	28.29	61.87
TraesCS3D01G386900.1	Wheat	mitochondrion	30.26	45.54
TraesCS2B01G283400.1	Wheat	mitochondrion	29.61	44.55
HORVU5Hr1G042680.1	Barley	mitochondrion, plasma membrane	28.95	44.22
Solyc10g045730.1.1	Tomato	mitochondrion	17.43	42.74
HORVU3Hr1G044970.1	Barley	endoplasmic reticulum, extracellular, vacuole	6.25	39.58
TraesCS7A01G526200.1	Wheat	mitochondrion, plasma membrane	31.58	38.87
TraesCS1B01G458600.1	Wheat	mitochondrion, plasma membrane	31.58	38.87
TraesCS7A01G238000.1	Wheat	mitochondrion	31.58	38.4
HORVU0Hr1G037060.1	Barley	endoplasmic reticulum	25.99	38.35
TraesCS7D01G286400.1	Wheat	mitochondrion, plasma membrane	31.25	38.31
TraesCS5B01G388600.1	Wheat	mitochondrion, plasma membrane	30.92	38.06
TraesCS4B01G238300.1	Wheat	mitochondrion, plasma membrane	31.91	37.74
TraesCS6B01G464600.1	Wheat	mitochondrion, plasma membrane	30.59	37.65
TraesCS2B01G284000.1	Wheat	mitochondrion, plasma membrane	30.59	37.65
ATMG00270.1	Thale cress	plasma membrane	25.33	37.56
BAC19862	Rice	plasma membrane	24.67	36.59
GRMZM5G897755_P01	Maize	plasma membrane	26.32	36.36
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	24.34	35.75
KRH45920	Soybean	plasma membrane, vacuole	25.33	35.16
BAV58153	Barley	mitochondrion, plasma membrane	32.89	32.05
TraesCS1A01G097900.1	Wheat	plasma membrane	22.37	31.63
HORVU3Hr1G040850.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	8.88	30.34
TraesCS7B01G051500.1	Wheat	mitochondrion, plasma membrane	31.25	30.25
TraesCS2D01G247500.1	Wheat	mitochondrion, plasma membrane	28.62	29.29
HORVU1Hr1G009350.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	8.22	28.09
HORVU7Hr1G044360.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	8.22	28.09
HORVU6Hr1G037090.1	Barley	cytosol, plastid, vacuole	5.59	12.5

Protein Annotations

Gene3D:1.20.120.1200	MapMan:35.1	UniProt:A0A1Z5R1U0	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	InterPro:NADH_UbQ/plastoQ_OxRdtase_su6	EnsemblPlants:OQU77742	ProteinID:OQU77742	ProteinID:OQU77742.1
PFAM:PF00499	PANTHER:PTHR33269	PANTHER:PTHR33269:SF4	EnsemblPlantsGene:SORBI_3009G095720	TMHMM:TMhelix	UniParc:UPI000B8BA583
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:30779517..30780798

Molecular Weight (calculated)

34300.6 Da

IEP (calculated)

6.347

GRAVY (calculated)

0.195

Length

304 amino acids

Sequence
(BLAST)

001: MCLLAPAFKF HFKEGRRTMI LSVLSSPALV SGLMVVRAKN PVHSVLFPIL VFYDTSGLLI LLGLDFSTMI FPVVHIGAIA VSFLSLDSNS RRSISPFGRR
101: SCYIFLYLYL PKQISRILFG LSFYFLTVKL FLLLLNSYPL FAPEALVFAS SYSGASAPAY DIMLFGHDDD DLSRAVAPFL PRGGGAPVTL PEERPLTMEE
201: EDRLALVLDY QNKIGALLKS LDISWLWGHH FDKESNEDLA AATLLHKDAE LNDPDKLWVV HEGLVQNKHS SRYYFRAIDW VRTERKVHNG ELPITFIIDD
301: DQDN

Best Arabidopsis Sequence Match ( ATMG00270.1 )
(BLAST)

001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY

Arabidopsis Description

NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.