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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:mitochondrion, plastid, secretory
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G040850.1 Barley endoplasmic reticulum, extracellular, plasma membrane 28.28 94.38
HORVU7Hr1G044360.1 Barley endoplasmic reticulum, extracellular, plasma membrane 27.95 93.26
TraesCS1B01G458600.1 Wheat mitochondrion, plasma membrane 76.09 91.5
HORVU1Hr1G009350.1 Barley endoplasmic reticulum, extracellular, plasma membrane 27.27 91.01
TraesCS6B01G464600.1 Wheat mitochondrion, plasma membrane 75.42 90.69
TraesCS3D01G386900.1 Wheat mitochondrion 60.94 89.6
TraesCS2B01G284000.1 Wheat mitochondrion, plasma membrane 74.41 89.47
TraesCS2B01G283400.1 Wheat mitochondrion 60.27 88.61
TraesCS7A01G238000.1 Wheat mitochondrion 71.38 84.8
TraesCS7D01G286400.1 Wheat mitochondrion, plasma membrane 70.71 84.68
BAC19862 Rice plasma membrane 58.25 84.39
HORVU6Hr1G037090.1 Barley cytosol, plastid, vacuole 38.38 83.82
ATMG00270.1 Thale cress plasma membrane 57.24 82.93
HORVU3Hr1G044970.1 Barley endoplasmic reticulum, extracellular, vacuole 13.13 81.25
TraesCS7D01G285400.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 25.59 80.85
GRMZM5G897755_P01 Maize plasma membrane 59.6 80.45
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 55.22 79.23
KXG19687 Sorghum mitochondrion 36.03 76.98
KRH45920 Soybean plasma membrane, vacuole 56.57 76.71
Solyc10g045730.1.1 Tomato mitochondrion 25.25 60.48
OQU75662 Sorghum mitochondrion, plasma membrane 28.62 37.95
OQU77742 Sorghum mitochondrion 29.29 28.62
Protein Annotations
EnsemblPlants:TraesCS2D01G247500.1EnsemblPlantsGene:TraesCS2D01G247500Gene3D:1.20.120.1200GO:GO:0003674GO:GO:0003824GO:GO:0008137
GO:GO:0008150GO:GO:0008152GO:GO:0055114InterPro:NADH_UbQ/plastoQ_OxRdtase_su6PANTHER:PTHR33269PANTHER:PTHR33269:SF4
PFAM:PF00499TMHMM:TMhelixMapMan:2.4.1.3.7:::
Description
No Description!
Coordinates
chr2D:+:291707320..291708215
Molecular Weight (calculated)
34246.7 Da
IEP (calculated)
9.709
GRAVY (calculated)
0.475
Length
297 amino acids
Sequence
(BLAST)
001: MRLLAPAFKF HFKGGRCTMI LYVLSSPTLV SGLMVVRAKN PVHFGFFFIL VFCDTSGLLI FLGLDFSAMI SLVVHIGAII SFLFVVMMFN IQIAEIHEEV
101: LRYLPVSGII GLIFWWEMFF ILDNETIPLL PTHRNTTSLR YTVYVGKVRS WTNLETLGNL LYTYYSVWFL VSSLILLVAM IGAIVLTMHR TTKVKREDLF
201: RRNALDSRRN IMNRTISPFG HIHRRSFSSG AGGPPDNYKE TFKRWILCLE YQSFPGLKCN IDSLLSFLEP REILFMVHTF PRDFPLLEIL EPRISAI
Best Arabidopsis Sequence Match ( ATMG00270.1 )
(BLAST)
001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
Arabidopsis Description
NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.