Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G285400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 43.56 | 93.62 |
| HORVU5Hr1G042680.1 | Barley | mitochondrion, plasma membrane | 88.12 | 89.45 |
| HORVU0Hr1G037060.1 | Barley | endoplasmic reticulum | 85.15 | 83.5 |
| KXG19687 | Sorghum | mitochondrion | 56.93 | 82.73 |
| BAC19862 | Rice | plasma membrane | 83.66 | 82.44 |
| ATMG00270.1 | Thale cress | plasma membrane | 82.67 | 81.46 |
| GRMZM5G897755_P01 | Maize | plasma membrane | 86.63 | 79.55 |
| TraesCS5B01G388600.1 | Wheat | mitochondrion, plasma membrane | 94.06 | 76.92 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 78.71 | 76.81 |
| TraesCS4B01G238300.1 | Wheat | mitochondrion, plasma membrane | 96.53 | 75.88 |
| TraesCS7D01G286400.1 | Wheat | mitochondrion, plasma membrane | 93.07 | 75.81 |
| KRH45920 | Soybean | plasma membrane, vacuole | 82.18 | 75.8 |
| Solyc10g045730.1.1 | Tomato | mitochondrion | 38.61 | 62.9 |
| TraesCS2D01G247500.1 | Wheat | mitochondrion, plasma membrane | 89.6 | 60.94 |
| BAV58153 | Barley | mitochondrion, plasma membrane | 94.06 | 60.9 |
| OQU75662 | Sorghum | mitochondrion, plasma membrane | 46.53 | 41.96 |
| OQU77742 | Sorghum | mitochondrion | 45.54 | 30.26 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G386900.1 | EnsemblPlantsGene:TraesCS3D01G386900 | Gene3D:1.20.120.1200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008137 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:NADH_UbQ/plastoQ_OxRdtase_su6 | PANTHER:PTHR33269 | PANTHER:PTHR33269:SF4 |
| PFAM:PF00499 | TMHMM:TMhelix | MapMan:2.4.1.3.7 | : | : | : |
Description
No Description!
Coordinates
chr3D:+:501885979..501886587
Molecular Weight (calculated)
22772.9 Da
IEP (calculated)
10.108
GRAVY (calculated)
0.826
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLLAPAFKF HFKGGRCTMI LSVLSSPALV SGLMVVRAKN PVHSVLFPIL VFCDTSGLLI LLGLDFSAMI SPVVHIGAIA VSFLFMVMMF NIQIAEIHEE
101: VLRYLLVSGI IGLIFWWEMF IILDNGTIPL LPTHRNMTSL RYTVYGGKVR SWTNLETLGN LLYTYYSVWF LVSSLTLLVA MIGAIVLTMH RTTKVKRQDV
201: FR
101: VLRYLLVSGI IGLIFWWEMF IILDNGTIPL LPTHRNMTSL RYTVYGGKVR SWTNLETLGN LLYTYYSVWF LVSSLTLLVA MIGAIVLTMH RTTKVKRQDV
201: FR
001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
Arabidopsis Description
NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.