Factsheet for HORVU0Hr1G037060.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G040850.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	42.23	97.75
HORVU7Hr1G044360.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	41.26	95.51
HORVU1Hr1G009350.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	40.78	94.38
HORVU6Hr1G037090.1	Barley	cytosol, plastid, vacuole	61.16	92.65
BAC19862	Rice	plasma membrane	88.83	89.27
ATMG00270.1	Thale cress	plasma membrane	87.38	87.8
HORVU5Hr1G042680.1	Barley	mitochondrion, plasma membrane	83.01	85.93
HORVU3Hr1G044970.1	Barley	endoplasmic reticulum, extracellular, vacuole	19.9	85.42
TraesCS3D01G386900.1	Wheat	mitochondrion	83.5	85.15
GRMZM5G897755_P01	Maize	plasma membrane	90.29	84.55
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	83.98	83.57
KRH45920	Soybean	plasma membrane, vacuole	87.38	82.19
TraesCS5B01G388600.1	Wheat	mitochondrion, plasma membrane	90.29	75.3
TraesCS4B01G238300.1	Wheat	mitochondrion, plasma membrane	91.75	73.54
KXG19687	Sorghum	mitochondrion	48.54	71.94
BAV58153	Barley	mitochondrion, plasma membrane	99.03	65.38
Solyc10g045730.1.1	Tomato	mitochondrion	35.44	58.87
OQU75662	Sorghum	mitochondrion, plasma membrane	38.35	35.27
OQU77742	Sorghum	mitochondrion	38.35	25.99

Protein Annotations

Gene3D:1.20.120.1200	MapMan:2.4.1.3.7	UniProt:A0A287EBW5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008137	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU0Hr1G037060
EnsemblPlants:HORVU0Hr1G037060.1	InterPro:NADH_UbQ/plastoQ_OxRdtase_su6	PFAM:PF00499	PANTHER:PTHR33269	PANTHER:PTHR33269:SF4	TMHMM:TMhelix
UniParc:UPI000B4805C7	:	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:-:230995050..230995667

Molecular Weight (calculated)

23050.9 Da

IEP (calculated)

9.730

GRAVY (calculated)

0.700

Length

206 amino acids

Sequence
(BLAST)

001: MILSVLSSPA LVSGLMVVRA KNPVHSVLFP ILVFCDTSGL LILLGLDFSA MISPVVHIGA IAVSFLFVVM MFNIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNETI PLLPTHRNTT SLRYTVYAGK VRSWTXXLET LGNLLYTYYS VWFLVSSLIL LVAMIGAIVL TMHKTTEVKR QDVFRRNALD SRRNIMRSMT
201: IPNGSR

Best Arabidopsis Sequence Match ( ATMG00270.1 )
(BLAST)

001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY

Arabidopsis Description

NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.