Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G040850.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 87.5 | 47.19 |
| HORVU1Hr1G009350.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 81.25 | 43.82 |
| HORVU7Hr1G044360.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 79.17 | 42.7 |
| KXG19687 | Sorghum | mitochondrion | 83.33 | 28.78 |
| TraesCS2B01G283400.1 | Wheat | mitochondrion | 87.5 | 20.79 |
| BAC19862 | Rice | plasma membrane | 87.5 | 20.49 |
| ATMG00270.1 | Thale cress | plasma membrane | 85.42 | 20.0 |
| TraesCS1A01G097900.1 | Wheat | plasma membrane | 89.58 | 20.0 |
| HORVU0Hr1G037060.1 | Barley | endoplasmic reticulum | 85.42 | 19.9 |
| HORVU5Hr1G042680.1 | Barley | mitochondrion, plasma membrane | 81.25 | 19.6 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 83.33 | 19.32 |
| GRMZM5G897755_P01 | Maize | plasma membrane | 87.5 | 19.09 |
| KRH45920 | Soybean | plasma membrane, vacuole | 83.33 | 18.26 |
| TraesCS1B01G458600.1 | Wheat | mitochondrion, plasma membrane | 89.58 | 17.41 |
| TraesCS7A01G526200.1 | Wheat | mitochondrion, plasma membrane | 89.58 | 17.41 |
| TraesCS2B01G284000.1 | Wheat | mitochondrion, plasma membrane | 87.5 | 17.0 |
| TraesCS6B01G464600.1 | Wheat | mitochondrion, plasma membrane | 87.5 | 17.0 |
| TraesCS7D01G286400.1 | Wheat | mitochondrion, plasma membrane | 87.5 | 16.94 |
| Solyc10g045730.1.1 | Tomato | mitochondrion | 43.75 | 16.94 |
| HORVU6Hr1G037090.1 | Barley | cytosol, plastid, vacuole | 45.83 | 16.18 |
| TraesCS7A01G238000.1 | Wheat | mitochondrion | 83.33 | 16.0 |
| TraesCS7B01G051500.1 | Wheat | mitochondrion, plasma membrane | 87.5 | 13.38 |
| BAV58153 | Barley | mitochondrion, plasma membrane | 85.42 | 13.14 |
| TraesCS2D01G247500.1 | Wheat | mitochondrion, plasma membrane | 81.25 | 13.13 |
| OQU75662 | Sorghum | mitochondrion, plasma membrane | 39.58 | 8.48 |
| OQU77742 | Sorghum | mitochondrion | 39.58 | 6.25 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G044970.1 | EnsemblPlantsGene:HORVU3Hr1G044970 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR33269 |
| PANTHER:PTHR33269:SF4 | TMHMM:TMhelix | UniParc:UPI000B462058 | UniProt:A0A287KXI1 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr3H:-:292710879..292711486
Molecular Weight (calculated)
5482.0 Da
IEP (calculated)
5.415
GRAVY (calculated)
1.442
Length
48 amino acids
Sequence
(BLAST)
(BLAST)
1: MISQVVHIGS IAVSFLFLVM MFNIQIAEIH EEVLCYLRVS GIIGLIFW
001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
Arabidopsis Description
NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.