Factsheet for HORVU6Hr1G037090.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

cytosol 1
plastid 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, vacuole
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G040850.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	47.06	71.91
HORVU7Hr1G044360.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	46.32	70.79
HORVU1Hr1G009350.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	45.59	69.66
HORVU0Hr1G037060.1	Barley	endoplasmic reticulum	92.65	61.16
BAC19862	Rice	plasma membrane	81.62	54.15
ATMG00270.1	Thale cress	plasma membrane	80.15	53.17
TraesCS1A01G097900.1	Wheat	plasma membrane	83.09	52.56
HORVU5Hr1G042680.1	Barley	mitochondrion, plasma membrane	74.26	50.75
TraesCS2B01G283400.1	Wheat	mitochondrion	75.0	50.49
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	76.47	50.24
GRMZM5G897755_P01	Maize	plasma membrane	80.88	50.0
KRH45920	Soybean	plasma membrane, vacuole	79.41	49.32
TraesCS7D01G286400.1	Wheat	mitochondrion, plasma membrane	83.82	45.97
HORVU3Hr1G044970.1	Barley	endoplasmic reticulum, extracellular, vacuole	16.18	45.83
TraesCS1B01G458600.1	Wheat	mitochondrion, plasma membrane	83.09	45.75
TraesCS7A01G526200.1	Wheat	mitochondrion, plasma membrane	83.09	45.75
TraesCS7A01G238000.1	Wheat	mitochondrion	83.82	45.6
TraesCS6B01G464600.1	Wheat	mitochondrion, plasma membrane	82.35	45.34
TraesCS2B01G284000.1	Wheat	mitochondrion, plasma membrane	80.88	44.53
BAV58153	Barley	mitochondrion, plasma membrane	93.38	40.71
TraesCS2D01G247500.1	Wheat	mitochondrion, plasma membrane	83.82	38.38
TraesCS7B01G051500.1	Wheat	mitochondrion, plasma membrane	81.62	35.35
Solyc10g045730.1.1	Tomato	mitochondrion	21.32	23.39
KXG19687	Sorghum	mitochondrion	22.79	22.3
OQU75662	Sorghum	mitochondrion, plasma membrane	11.76	7.14
OQU77742	Sorghum	mitochondrion	12.5	5.59

Protein Annotations

EnsemblPlants:HORVU6Hr1G037090.1	EnsemblPlantsGene:HORVU6Hr1G037090	Gene3D:1.20.120.1200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0055114	InterPro:NADH_UbQ/plastoQ_OxRdtase_su6	PANTHER:PTHR33269	PANTHER:PTHR33269:SF4	PFAM:PF00499	TMHMM:TMhelix
UniParc:UPI000B478072	UniProt:A0A287TXW0	MapMan:2.4.1.3.7	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:185207878..185208492

Molecular Weight (calculated)

16031.7 Da

IEP (calculated)

9.677

GRAVY (calculated)

0.086

Length

136 amino acids

Sequence
(BLAST)

001: MMYNIQIAEI REEVLRYLPV SGIIGLNFWW EMLFILDNET IPLLPAHRNT TSLRYTVYAG KVRSWTNLET LDNLLYTYYS VWFLVSRVIL LVAMIGAIVL
101: TMHKTTEVER QDVFRRNALD SRRNIMRSMT IPNGSR

Best Arabidopsis Sequence Match ( ATMG00270.1 )
(BLAST)

001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY

Arabidopsis Description

NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.