Factsheet for TraesCS7A01G238000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G040850.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	34.0	95.51
TraesCS1A01G097900.1	Wheat	plasma membrane	82.0	95.35
HORVU7Hr1G044360.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	33.2	93.26
HORVU1Hr1G009350.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	32.0	89.89
BAC19862	Rice	plasma membrane	72.4	88.29
TraesCS7A01G526200.1	Wheat	mitochondrion, plasma membrane	87.2	88.26
TraesCS2B01G284000.1	Wheat	mitochondrion, plasma membrane	86.0	87.04
ATMG00270.1	Thale cress	plasma membrane	71.2	86.83
GRMZM5G897755_P01	Maize	plasma membrane	74.4	84.55
HORVU6Hr1G037090.1	Barley	cytosol, plastid, vacuole	45.6	83.82
HORVU3Hr1G044970.1	Barley	endoplasmic reticulum, extracellular, vacuole	16.0	83.33
KXG19687	Sorghum	mitochondrion	46.0	82.73
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	68.4	82.61
KRH45920	Soybean	plasma membrane, vacuole	71.2	81.28
TraesCS2D01G247500.1	Wheat	mitochondrion, plasma membrane	84.8	71.38
Solyc10g045730.1.1	Tomato	mitochondrion	30.8	62.1
OQU75662	Sorghum	mitochondrion, plasma membrane	35.6	39.73
OQU77742	Sorghum	mitochondrion	38.4	31.58

Protein Annotations

EnsemblPlants:TraesCS7A01G238000.1	EnsemblPlantsGene:TraesCS7A01G238000	Gene3D:1.20.120.1200	GO:GO:0003674	GO:GO:0003824	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:NADH_UbQ/plastoQ_OxRdtase_su6	PANTHER:PTHR33269	PANTHER:PTHR33269:SF4
PFAM:PF00499	TMHMM:TMhelix	MapMan:2.4.1.3.7	:	:	:

Description

No Description!

Coordinates

chr7A:-:211363686..211364438

Molecular Weight (calculated)

28483.2 Da

IEP (calculated)

10.242

GRAVY (calculated)

0.426

Length

250 amino acids

Sequence
(BLAST)

001: MHLLAPAFKF HFKGGRHTII LSVLSSPALV SGLMVVRAKN PVHSVLFPIL VFCDTSGLLI FLGLDFSTMI SPVVHIGAIV ISFLFVVMMF NIQIAEIHEE
101: VLRYLPVTGI IGLIFWWEMF FILDNETIPL LPTHRNTTSL RYTVYAGKVR SWTNLETLGN LLYTYYSVWF LVSSLILLVA MIGAIVLTMH RTTRVKRQDV
201: FRRNALDSRR NIMNRTISPF GHSHRRSFSS KADGGESQDS YNPAYIDFLR

Best Arabidopsis Sequence Match ( ATMG00270.1 )
(BLAST)

001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY

Arabidopsis Description

NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.