Factsheet for TraesCS5B01G388600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G458600.1	Wheat	mitochondrion, plasma membrane	96.76	96.76
TraesCS6B01G464600.1	Wheat	mitochondrion, plasma membrane	95.55	95.55
TraesCS2B01G283400.1	Wheat	mitochondrion	77.33	94.55
TraesCS2B01G284000.1	Wheat	mitochondrion, plasma membrane	94.33	94.33
TraesCS3D01G386900.1	Wheat	mitochondrion	76.92	94.06
HORVU5Hr1G042680.1	Barley	mitochondrion, plasma membrane	73.28	90.95
HORVU0Hr1G037060.1	Barley	endoplasmic reticulum	75.3	90.29
BAC19862	Rice	plasma membrane	74.09	89.27
TraesCS4B01G238300.1	Wheat	mitochondrion, plasma membrane	92.31	88.72
ATMG00270.1	Thale cress	plasma membrane	72.47	87.32
GRMZM5G897755_P01	Maize	plasma membrane	75.3	84.55
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	69.64	83.09
KXG19687	Sorghum	mitochondrion	46.15	82.01
KRH45920	Soybean	plasma membrane, vacuole	71.66	80.82
TraesCS7B01G051500.1	Wheat	mitochondrion, plasma membrane	95.14	74.84
BAV58153	Barley	mitochondrion, plasma membrane	89.88	71.15
Solyc10g045730.1.1	Tomato	mitochondrion	32.39	64.52
OQU75662	Sorghum	mitochondrion, plasma membrane	38.06	41.96
OQU77742	Sorghum	mitochondrion	38.06	30.92
TraesCS3B01G301300.1	Wheat	extracellular	6.88	9.44

Protein Annotations

EnsemblPlants:TraesCS5B01G388600.1	EnsemblPlantsGene:TraesCS5B01G388600	Gene3D:1.20.120.1200	GO:GO:0003674	GO:GO:0003824	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:NADH_UbQ/plastoQ_OxRdtase_su6	PANTHER:PTHR33269	PANTHER:PTHR33269:SF4
PFAM:PF00499	SEG:seg	TMHMM:TMhelix	MapMan:2.4.1.3.7	:	:

Description

No Description!

Coordinates

chr5B:+:567279985..567280728

Molecular Weight (calculated)

28326.4 Da

IEP (calculated)

10.557

GRAVY (calculated)

0.455

Length

247 amino acids

Sequence
(BLAST)

001: MRLLAPTFKF HFKGGRRTMI LSVLSSPALV SGLMVVRAKN PVHSVLFPIL VFCDTFGLLI LLGLDFSAMI SPVVHIGAIA VSFLFMVMMF NLQIAEIHEE
101: VLRYLPVSGI IGLIFWWEMF FILDNETIPL LPTHRYTTSL RYTVYAGKVR SWTNLETLCN LLYTYYSVWF LVSSLILLVA MIGAIVLTMH RTTKVKRQDV
201: FRRNALDSRS HIMNRTISPF GHSHRRSFSS RAGGPPDNYK ETFKMWI

Best Arabidopsis Sequence Match ( ATMG00270.1 )
(BLAST)

001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY

Arabidopsis Description

NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.