Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19687 | Sorghum | mitochondrion | 90.43 | 61.15 |
| Solyc10g045730.1.1 | Tomato | mitochondrion | 59.57 | 45.16 |
| TraesCS3D01G386900.1 | Wheat | mitochondrion | 93.62 | 43.56 |
| ATMG00270.1 | Thale cress | plasma membrane | 88.3 | 40.49 |
| GRMZM5G897755_P01 | Maize | plasma membrane | 94.68 | 40.45 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 87.23 | 39.61 |
| KRH45920 | Soybean | plasma membrane, vacuole | 89.36 | 38.36 |
| TraesCS7D01G286400.1 | Wheat | mitochondrion, plasma membrane | 90.43 | 34.27 |
| OQU75662 | Sorghum | mitochondrion, plasma membrane | 70.21 | 29.46 |
| TraesCS2D01G247500.1 | Wheat | mitochondrion, plasma membrane | 80.85 | 25.59 |
| OQU77742 | Sorghum | mitochondrion | 69.15 | 21.38 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G285400.1 | EnsemblPlantsGene:TraesCS7D01G285400 | Gene3D:1.20.120.1200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008137 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:NADH_UbQ/plastoQ_OxRdtase_su6 | PANTHER:PTHR33269 | PANTHER:PTHR33269:SF4 |
| PFAM:PF00499 | SEG:seg | TMHMM:TMhelix | MapMan:2.4.1.3.7 | : | : |
Description
No Description!
Coordinates
chr7D:-:307032323..307032607
Molecular Weight (calculated)
10238.2 Da
IEP (calculated)
4.718
GRAVY (calculated)
1.409
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MILSVLSSPA LVSSLMVVRA KNPVHSVLFP ILVFCDTSGL LILLGLDFSA MIFPVVHIGA IAVSFLFMVM MFNIQIAEIH EEVLCYLPVS GIMD
001: MILSVLSSPA LVSGLMVARA KNPVHSVLFP IPVFRDTSGL LLLLGLDFFA MIFPVVHIGA IAVSFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
101: MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYSV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD
201: PLTIY
Arabidopsis Description
NAD6NADH-ubiquinone oxidoreductase chain 6 [Source:UniProtKB/TrEMBL;Acc:G1C2Y0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.