CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GRMZM5G887911_P01	Maize	endoplasmic reticulum, extracellular	31.11	97.22
TraesCSU01G272200.1	Wheat	cytosol	40.0	91.84
TraesCSU01G151200.1	Wheat	endoplasmic reticulum, plastid, vacuole	39.56	90.82
TraesCS6D01G200600.1	Wheat	cytosol	39.11	89.8
TraesCS6B01G207600.1	Wheat	cytosol	39.11	89.8
TraesCS6B01G232200.1	Wheat	endoplasmic reticulum, plastid, vacuole	38.22	87.76
TraesCS6A01G202600.1	Wheat	cytosol	38.22	87.76
TraesCS3A01G502400.1	Wheat	cytosol	40.44	87.5
HORVU4Hr1G038830.1	Barley	cytosol	36.44	87.23
TraesCS5D01G063300.1	Wheat	endoplasmic reticulum, plastid, vacuole	37.78	86.73
HORVU7Hr1G058370.1	Barley	cytosol, vacuole	36.0	86.17
TraesCS2A01G132800.1	Wheat	cytosol, extracellular, vacuole	37.33	85.71
TraesCS2D01G247100.1	Wheat	cytosol, endoplasmic reticulum, vacuole	36.89	84.69
TraesCS4A01G427800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.89	84.69
TraesCS2D01G089700.1	Wheat	cytosol	36.44	83.67
HORVU5Hr1G072340.1	Barley	endoplasmic reticulum, vacuole	34.22	81.91
TraesCS5A01G117000.1	Wheat	cytosol, nucleus, vacuole	32.89	74.0
CDY45553	Canola	endoplasmic reticulum, plasma membrane	44.89	60.12
TraesCS5B01G098400.1	Wheat	plasma membrane	52.0	56.25
TraesCS3D01G520700.1	Wheat	plasma membrane	51.11	55.29
ATMG00285.1	Thale cress	endoplasmic reticulum	45.33	53.12
Solyc03g061540.1.1	Tomato	extracellular	24.89	50.0
KRH76174	Soybean	plasma membrane, vacuole	40.44	45.73

Protein Annotations

MapMan:35.1	UniProt:A0A1W0W458	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091	GO:GO:0006139	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0042773
GO:GO:0055114	InterPro:ND/Mrp_mem	EnsemblPlants:OQU89126	ProteinID:OQU89126	ProteinID:OQU89126.1	PFAM:PF00361
PANTHER:PTHR22773	PANTHER:PTHR22773:SF102	EnsemblPlantsGene:SORBI_3002G149550	UniParc:UPI0009DC83A2	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:41890042..41892874

Molecular Weight (calculated)

24914.6 Da

IEP (calculated)

4.695

GRAVY (calculated)

-0.158

Length

225 amino acids

Sequence
(BLAST)

001: MHAIGAPDAA VSFELNQANH EGPEITQEAE VQPGGQEEPE EEVECPNHEP ASFVKGERPN PFATARLANR TQQEQGNSPG SGRHMSPNAI MNVRPTLHYV
101: GTCAWRRDNF TYFCQILLLL STAGTISMCF DSFERERFDA FEFILLIPLP TRSMLLMIPA HDLIAMYLAI ELQSLCFYVI AASKRKSEFS TGAGSKYLSL
201: GAFPSGILLF GCDRTTTDQF LETSL

Best Arabidopsis Sequence Match ( ATMG00285.1 )
(BLAST)

001: MKAEFVRILP HMFNLFLAVS PEIFIINATS ILLIHGVVFS TSKKYDYPPL ASNVGWLGLL SVLITLLLLA AGAPLLTIAH LFWNNLFRRD NFTYFCQIFL
101: LLSTAGTISM CFDSSDQERF DAFEFIVLIP LPTRGMLFMI SAHDLIAMYL AIEPQSLCFY VIAASKRKSE FSTEAGSKYL ILGAFSSGIL LF

Arabidopsis Description

NAD2ANADH dehydrogenase 2A [Source:TAIR;Acc:ATMG00285]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.