Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G272200.1 | Wheat | cytosol | 46.63 | 98.98 |
| TraesCS6D01G200600.1 | Wheat | cytosol | 45.67 | 96.94 |
| GRMZM5G887911_P01 | Maize | endoplasmic reticulum, extracellular | 33.17 | 95.83 |
| TraesCS6A01G202600.1 | Wheat | cytosol | 44.71 | 94.9 |
| TraesCS6B01G207600.1 | Wheat | cytosol | 44.71 | 94.9 |
| TraesCS6B01G232200.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 44.71 | 94.9 |
| TraesCS3A01G502400.1 | Wheat | cytosol | 46.63 | 93.27 |
| TraesCS4A01G427800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 43.27 | 91.84 |
| TraesCS2A01G132800.1 | Wheat | cytosol, extracellular, vacuole | 42.79 | 90.82 |
| TraesCS2D01G089700.1 | Wheat | cytosol | 42.79 | 90.82 |
| ATMG00285.1 | Thale cress | endoplasmic reticulum | 80.29 | 86.98 |
| CDY45553 | Canola | endoplasmic reticulum, plasma membrane | 62.5 | 77.38 |
| Solyc03g061540.1.1 | Tomato | extracellular | 36.06 | 66.96 |
| OQU89126 | Sorghum | cytosol | 56.25 | 52.0 |
| KRH76174 | Soybean | plasma membrane, vacuole | 46.15 | 48.24 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G098400.1 | EnsemblPlantsGene:TraesCS5B01G098400 | InterPro:ND/Mrp_mem | PANTHER:PTHR22773 | PANTHER:PTHR22773:SF102 | PFAM:PF00361 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:130569193..130570636
Molecular Weight (calculated)
23488.1 Da
IEP (calculated)
6.094
GRAVY (calculated)
0.655
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVEEVIETR NHMFNLFLAV SPEIFIINTT FILLIHGVVF STSKKDDYPP LVSNVGWLGL LSVLITLLLL AAGAPLLTIA HLFWNNFFRR DNFTYFCQIL
101: LLLSTAGTIS MCFDFFEKER FDASEFIVLI PLPTRSMLLM IPAHDLIAMY LAIELQSLCF YVIAASKRKS EFSTEAGSKY LILGAFPSGI LLFGCNRTTT
201: DQFLGTYL
101: LLLSTAGTIS MCFDFFEKER FDASEFIVLI PLPTRSMLLM IPAHDLIAMY LAIELQSLCF YVIAASKRKS EFSTEAGSKY LILGAFPSGI LLFGCNRTTT
201: DQFLGTYL
001: MKAEFVRILP HMFNLFLAVS PEIFIINATS ILLIHGVVFS TSKKYDYPPL ASNVGWLGLL SVLITLLLLA AGAPLLTIAH LFWNNLFRRD NFTYFCQIFL
101: LLSTAGTISM CFDSSDQERF DAFEFIVLIP LPTRGMLFMI SAHDLIAMYL AIEPQSLCFY VIAASKRKSE FSTEAGSKYL ILGAFSSGIL LF
101: LLSTAGTISM CFDSSDQERF DAFEFIVLIP LPTRGMLFMI SAHDLIAMYL AIEPQSLCFY VIAASKRKSE FSTEAGSKYL ILGAFSSGIL LF
Arabidopsis Description
NAD2ANADH dehydrogenase 2A [Source:TAIR;Acc:ATMG00285]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.