CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

plastid 1
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G151200.1	Wheat	endoplasmic reticulum, plastid, vacuole	35.18	71.43
TraesCS6A01G202600.1	Wheat	cytosol	35.18	71.43
GRMZM5G887911_P01	Maize	endoplasmic reticulum, extracellular	25.63	70.83
TraesCSU01G272200.1	Wheat	cytosol	34.67	70.41
TraesCS6D01G200600.1	Wheat	cytosol	34.67	70.41
TraesCS6B01G232200.1	Wheat	endoplasmic reticulum, plastid, vacuole	34.67	70.41
HORVU4Hr1G038830.1	Barley	cytosol	33.17	70.21
TraesCS6B01G207600.1	Wheat	cytosol	34.17	69.39
TraesCS2A01G132800.1	Wheat	cytosol, extracellular, vacuole	33.67	68.37
TraesCS5D01G063300.1	Wheat	endoplasmic reticulum, plastid, vacuole	33.67	68.37
TraesCS2D01G089700.1	Wheat	cytosol	33.17	67.35
TraesCS3A01G502400.1	Wheat	cytosol	35.18	67.31
HORVU7Hr1G058370.1	Barley	cytosol, vacuole	31.66	67.02
HORVU5Hr1G072340.1	Barley	endoplasmic reticulum, vacuole	31.16	65.96
CDY45553	Canola	endoplasmic reticulum, plasma membrane	55.28	65.48
TraesCS4A01G427800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	32.16	65.31
TraesCS2D01G247100.1	Wheat	cytosol, endoplasmic reticulum, vacuole	31.66	64.29
TraesCS5A01G117000.1	Wheat	cytosol, nucleus, vacuole	29.65	59.0
ATMG00285.1	Thale cress	endoplasmic reticulum	52.76	54.69
TraesCS3D01G520700.1	Wheat	plasma membrane	49.25	47.12
TraesCS5B01G098400.1	Wheat	plasma membrane	48.24	46.15
OQU89126	Sorghum	cytosol	45.73	40.44

Protein Annotations

MapMan:35.1	UniProt:A0A0R0LAY8	EMBL:ACUP02000580	EnsemblPlantsGene:GLYMA_01G136900	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091
GO:GO:0006139	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0042773	GO:GO:0055114	EnsemblPlants:KRH76174	ProteinID:KRH76174	ProteinID:KRH76174.1
InterPro:ND/Mrp_mem	PFAM:PF00361	PANTHER:PTHR22773	PANTHER:PTHR22773:SF102	TMHMM:TMhelix	UniParc:UPI0006EDD9DA

Description

hypothetical protein

Coordinates

chr1:-:46188690..46191970

Molecular Weight (calculated)

22824.9 Da

IEP (calculated)

7.332

GRAVY (calculated)

0.265

Length

199 amino acids

Sequence
(BLAST)

001: MKTKFVRILP HIELAYSLWG NQYSEPNKVE LTSGTWLYPA HISLAMLNRL ASSLAATFCL PYPCYNPIPS YTLPAKQDAL RFLLDKRDNF TYFCQILLLL
101: STVGTISMCF DSSKQERYDA FEFIILIPLP TRNMLFMILA HDSIAMYLAI EPQSLCFYVM VASKRKFEFS MEVGSKYLIS GAFSFGILLF GYDWTTTDT

Best Arabidopsis Sequence Match ( ATMG00285.1 )
(BLAST)

001: MKAEFVRILP HMFNLFLAVS PEIFIINATS ILLIHGVVFS TSKKYDYPPL ASNVGWLGLL SVLITLLLLA AGAPLLTIAH LFWNNLFRRD NFTYFCQIFL
101: LLSTAGTISM CFDSSDQERF DAFEFIVLIP LPTRGMLFMI SAHDLIAMYL AIEPQSLCFY VIAASKRKSE FSTEAGSKYL ILGAFSSGIL LF

Arabidopsis Description

NAD2ANADH dehydrogenase 2A [Source:TAIR;Acc:ATMG00285]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.